KEGG   Rattus norvegicus (rat): 315291
Entry
315291            CDS       T01003                                 
Symbol
Ccnt1
Name
(RefSeq) cyclin-T1
  KO
K15188  cyclin T
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
rno05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    315291 (Ccnt1)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    315291 (Ccnt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    315291 (Ccnt1)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     315291 (Ccnt1)
    Brd4/P-TEFb complex
     315291 (Ccnt1)
    7SK RNP complex
     315291 (Ccnt1)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 315291
NCBI-ProteinID: NP_001399552
RGD: 1311151
Ensembl: ENSRNOG00000053054
Position
7:complement(131566176..131596988)
AA seq 724 aa
MEGERKNNNKRWYFTREQLENSPSRRFGVDSDKELSYRQQAANLLQDMGQRLNVSQLTIN
TAIVYMHRFYMIQSFTQFHRYSMAPAALFLAAKVEEQPKKLEHVIKVAHTCLHPQESLPD
TRSEAYLQQVQDLVILESIILQTLGFELTIDHPHTHVVKCTQLVRASKDLAQTSYFMATN
SLHLTTFSLQYTPPVVACVCIHLACKWSNWEIPVSTDGKHWWEYVDATVTLELLDELTHE
FLQILEKTPSRLKRIRNWRAYQAAMKTKPDDRGADENTSEQTILNMISQTSSDTTIAGLM
SMSAASTGAVPSLPASEESSSSLTSVDMLQGERWLSSQPPFKLEASQGHRTSENLALIGV
DHSLQHDGSNAFVSQKQTSKSVPSAKVSLKEYRAKHAEELAAQKRQLENMEANVKSQYAY
AAQNLLSHDSHSSVILKMPIEGSENPERPFLDKADKSALKMRLPVAGGDKAASSKPEEIK
MRIKVHSAGDKHNSVEDSVAKSREHKEKQRTHPSNHHHHHNHHSHKHSHLQLPVGPVSKR
PSDPKHSSQTSTLAHKTYSLSSTLSSSSSTRKRGPPEETGAAVFDHPAKIAKSTKSSSLN
FPFPPLPTMTQLPGHSSDTSGLPFSQPSCKTRVPHVKLDKGPPGANGHNTTQSIDYQDTV
NMLHSLLSAQGVQPTQPPAFEFVHSYGEYMNPRAAGISRSGNTDKPRPPPLPSEPPPPLP
PLPK
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggagggagagaggaagaacaacaacaaacggtggtattttactcgagaacaactggaa
aacagcccatcgcgtcgttttggcgtggactcagataaagaactatcttatcgccagcag
gcggccaatctactccaggacatgggacaacgtcttaacgtctcacaactgacgatcaat
actgccatagtatacatgcaccggttctacatgatccagtcttttacacagttccatcga
tactctatggctccagcggccttgtttctagcagcaaaagtagaagaacaaccaaaaaaa
ttggaacatgtcatcaaggtggcacacacttgcctccatccacaggagtcgcttcctgac
acgaggagtgaggcctacctacaacaagttcaagatctggtgattttagagagcataatt
ttgcagaccttagggtttgaacttacaattgatcacccacacacacatgtggtaaagtgc
acccaacttgttcgagcaagcaaggacttagcacagacatcttacttcatggcaaccaac
agcctgcatttgaccacatttagcctgcagtacacacctcctgtggtggcctgtgtctgc
atccatctggcttgcaagtggtccaactgggagatcccagtctcaactgacgggaagcac
tggtgggagtatgttgacgccactgtgaccttggaacttttagatgaattgacacatgaa
tttctacagattctagagaaaacaccaagcaggctgaaacgtattcggaattggagggca
taccaggctgccatgaaaaccaaaccggatgaccggggagcggatgaaaacacatcggag
cagacgattctcaatatgatttctcagacctcttcagacacaactatcgcaggcttaatg
agcatgtcagccgcgtctacaggtgcagtgccttccctgcctgcctctgaagagtcctcg
agcagtctaactagcgtggacatgttgcaaggcgagcggtggctgtcttctcaacctccc
tttaaactagaggcttctcagggtcatcggactagtgagaatttagcacttattggagtt
gatcattccttgcaacatgatggttcgaatgcatttgtttcccagaagcagactagcaag
agtgtgccatcagctaaagtttcacttaaagaataccgtgcaaagcacgctgaagagctg
gctgctcagaagaggcagctggagaacatggaggccaatgtgaagtcacagtatgcatat
gctgcccagaatctcctatctcatgacagccattcttcagttattctgaaaatgcccatc
gagggctcagaaaatcctgaacgtccttttctggataaggctgacaaatcagccctgaaa
atgagactcccagtggctggtggagataaagcggcctcttcaaaaccggaggagataaaa
atgcgcattaaagtgcactctgcaggtgacaagcacaactctgtagaagacagtgttgcc
aagagccgagagcacaaagagaagcagaggactcacccgtctaaccaccaccaccaccac
aaccaccactcacacaagcactctcacttacagctgccagttggccctgtgagcaaacga
ccaagtgatccaaaacacagcagccagacaagcaccttagcacacaaaacctatagcttg
tctagtactttgtcttcttcaagctctactcgtaaaagggggcccccagaagagactggg
gcagcagtatttgatcatccagccaagattgccaagagtactaaatcatcttccttgaat
ttccccttcccgcctcttcctacaatgacccagttgcctgggcatagctcagacacaagt
ggcctgcccttttcacagcctagctgtaaaaccagagttcctcatgtgaaactggataaa
ggccctcctggggctaacggtcacaacacaactcagtcaatagattatcaagatactgtg
aatatgctccactccctgcttagtgcccaaggtgttcagcccactcagccccctgcattt
gaatttgtccattcttatggtgaatatatgaatccgagagctgctggcatctccagatct
ggcaacacagacaaacctcggccaccacccctcccgtcagagccccctccacctcttcca
cctcttcctaagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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