KEGG   Rattus norvegicus (rat): 315346
Entry
315346            CDS       T01003                                 
Symbol
Itga5
Name
(RefSeq) integrin alpha-5
  KO
K06484  integrin alpha 5
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03266  Virion - Herpesvirus
rno04145  Phagosome
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno04640  Hematopoietic cell lineage
rno04810  Regulation of actin cytoskeleton
rno04820  Cytoskeleton in muscle cells
rno05100  Bacterial invasion of epithelial cells
rno05133  Pertussis
rno05135  Yersinia infection
rno05165  Human papillomavirus infection
rno05168  Herpes simplex virus 1 infection
rno05205  Proteoglycans in cancer
rno05206  MicroRNAs in cancer
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    315346 (Itga5)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    315346 (Itga5)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    315346 (Itga5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    315346 (Itga5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    315346 (Itga5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    315346 (Itga5)
   04810 Regulation of actin cytoskeleton
    315346 (Itga5)
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    315346 (Itga5)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    315346 (Itga5)
   05205 Proteoglycans in cancer
    315346 (Itga5)
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    315346 (Itga5)
   05165 Human papillomavirus infection
    315346 (Itga5)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    315346 (Itga5)
   05133 Pertussis
    315346 (Itga5)
   05100 Bacterial invasion of epithelial cells
    315346 (Itga5)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    315346 (Itga5)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    315346 (Itga5)
   05414 Dilated cardiomyopathy
    315346 (Itga5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    315346 (Itga5)
   04515 Cell adhesion molecules [BR:rno04515]
    315346 (Itga5)
   04090 CD molecules [BR:rno04090]
    315346 (Itga5)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   315346 (Itga5)
Cell adhesion molecules [BR:rno04515]
 Integrins
  Integrin alpha subunits
   315346 (Itga5)
CD molecules [BR:rno04090]
 Proteins
  315346 (Itga5)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 315346
NCBI-ProteinID: NP_001101588
RGD: 2925
Ensembl: ENSRNOG00000057451
UniProt: A6KD08
Position
7:complement(136358097..136381305)
AA seq 1099 aa
MPPRQPTRRPGGGPSRELGKLLPALSHSPLGGLGSGSGSVAPGQGRTGAMGSWTPRSPRS
PLHAVLLRWGPRRLPPLLPLLLLLWPPPLQVGGFNLDAEAPAVLSGPPGSLFGFSVEFYR
PGRDGVSVLVGAPKANTSQPGVLQGGAVYVCPWGTSPIQCSTIQFDSKGSRILESSLYSE
EPVEYKSLQWFGATVRAHGSSILACAPLYSWRTEKDPQNDPVGTCYLSTENFTRILEYAP
CRSDFGSAAGQGYCQGGFSAEFTKTGRVVLGGPGSYFWQGQILSATQEQISESYYPQYLI
NPVQGQLQTRQASSVYDDSYLGYSVAVGEFSGDDTEDFVAGVPKGNLTYGYVTVLNGSDI
HSLYNVSGEQMASYFGYAVAATDTNGDGLDDLLVGAPLLMERTADGRPQEVGRVYIYLQH
PEGIEPTPSLTLTGQDEFGRFGSSLTPLGDLDQDGYNDVAIGAPFGGEAQQGVVFIFPGG
PGGLNTKPSQVLQPLWAAGHTPDFFGSALRGGRDLDGNGYPDLIVGSFGVDKALVYRGRP
IISASASLTIFPSMFNPEERSCSLEGNPVSCINLSFCLNASGKHVPNSIGFEVELQLDWQ
KQKGGVRRALFLASKQATLTQTLLIQNGAREDCREMKIYLRNESEFRDKLSPIHIALNFS
LDPKAPMDSHGLRPVLHYQSKSRIEDKAQILLDCGEDNICVPDLQLAVYGEKKHVYLGDK
NALNLTFLAQNLGEGGAYEAELRVTAPLEAEYSGLVRHPGNFSSLSCDYFAVNQSRQLVC
DLGNPMKAGTSIWGGLRFTVPHLQDTKKTIQFDFQILSKNLNNSQSNMVSFPLSVEAQAQ
VSLNGVSKPEAVIFPVSDWNPQDQPQKEGDLGPAVHHVYELINQGPSSISQGVLEISCPQ
ALEGQQLLYVTKVTGLNNCTSNYTPNSQGLELDPEVSPHHLQRREAPGRSSTTSGTQVLK
CPEAKCFRLRCEFGPLHRQESRSLQLHFRVWAKTFLQQEYQPFSLQCEALYEALKMPYQI
LPRQLPQKKLQVATAVQWTKAEGSNGVPLWIIILAILFGLLLLGLLIYVLYKLGFFKRSL
PYGTAMEKAQLKPPATSDA
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgcccccccgccagccgacccggcggccggggggagggcccagccgggagttgggcaaa
ctcctccccgcgttgagtcattcgcctctgggaggtttaggaagcggctccgggtcggtg
gccccaggacagggaagaacgggcgctatggggagctggacgccacggtcgccacgatct
cctctccatgcggtgctgctgcgctgggggccccgacgcctaccgccgctgctgccgctg
ctgctgctactgtggccgccaccactccaggttgggggcttcaacctagacgcggaggcc
ccggcggtgctctccgggccccccggctccctctttggcttctccgtggagttttaccgg
ccgggaagggacggagtcagtgtgctggttggggcacccaaggctaacactagccaacca
ggagtactacaaggtggcgctgtctatgtgtgtccctggggcaccagtcctatccagtgc
agcaccattcaatttgacagcaaaggctcccgcatcctggagtcttcattgtatagtgag
gaacctgtggagtacaagtccttgcagtggttcggggcaacggttcgggcccacggctcc
tccatcttggcatgcgctccactgtatagctggcgcacagaaaaggacccacagaatgac
ccagtgggcacctgctacctctccacagaaaacttcacccggattctggagtatgcacct
tgccgctcagattttggcagtgcagcagggcagggttactgccaagggggcttcagtgcc
gagttcaccaagactggccgcgtggtcctaggaggacctgggagctacttctggcaaggc
cagatcctgtcggccactcaagagcagatctcggagtcctattacccacagtacctcatc
aaccctgttcaggggcagctgcagacccgccaggccagctccgtctatgatgacagctac
ttgggatactctgtggctgtaggtgaattcagtggtgatgacacagaagactttgttgct
ggcgtgcccaaaggaaacctcacctatggctatgtcactgtccttaatggctcagacatc
cactccctctacaacgtctcaggagaacagatggcctcctattttggctatgccgtagct
gccactgataccaatggagatgggctagatgacctgctggtaggggcacccctactcatg
gagcggacagctgacgggagacctcaggaggtgggcagggtctacatctatctgcagcac
ccagagggtatagagcctacgccctccctcaccctcactggccaagatgagttcggccga
ttcggcagctccttgacacccctgggggacctggaccaagacggctacaatgatgtcgcc
attggggctccgtttggtggggaggcccagcaaggagttgtatttatattcccgggaggc
ccaggaggactgaacactaagccttcccaggttttgcagcctctgtgggcagctggccat
accccagacttctttggctctgccctccgaggaggacgagatctggacggcaatggatac
cctgatctaatcgttggatcctttggtgtggacaaggctctggtatacaggggtcggccc
atcatatctgccagtgcgtctctcaccatcttcccctccatgttcaacccagaggagcgc
agctgcagcctggaaggaaaccctgtatcctgcatcaaccttagcttctgcctcaacgcc
tctggaaaacatgtacccaactctataggcttcgaggtggaactccaactggactggcag
aagcagaagggaggggtccggagggcactgttcctggcttccaagcaggccacccttacc
cagaccctgcttatccagaatggggctcgggaggactgcagggagatgaagatctacctc
aggaatgaatcagaattcagagacaaactctccccaattcacattgccctcaacttctcc
ttggaccccaaagcccccatggacagccatggcctccggccagtcctacactaccagagc
aagagccggatagaggacaaggcccagatcttgctagactgtggtgaagacaacatctgt
gtgcctgacctgcagctggctgtgtatggggagaagaaacatgtgtacctgggtgacaag
aacgccctgaacctgacattcctcgcccagaatctgggcgagggtggggcctatgaagcc
gagctgcgggtcacagcccccctggaggctgagtactcggggcttgtcagacacccaggg
aacttctccagcctgagctgtgactacttcgcggtgaaccagagccgccagctggtgtgt
gacctgggcaaccccatgaaggcaggcaccagtatctggggtggccttcggttcactgtt
cctcatcttcaagacacaaagaaaaccatccaatttgacttccagatcctcagcaagaac
ctgaacaactcacaaagcaacatggtctccttcccactctcggtggaggctcaagcccaa
gtctcccttaacggtgtctccaagcctgaagccgtgattttcccagtcagcgactggaat
cctcaagaccagcctcagaaggagggagatttgggccctgctgtccaccatgtctatgag
ctcattaaccaggggcccagctccatcagccagggtgtgctggagatcagctgtccccag
gctctggaaggccaacagctcctctatgtgaccaaggtgacgggactcaacaactgcacc
tccaactacacccccaactcacagggcctggagttggatccagaggtttctccacatcac
ctgcagaggcgagaggctccagggaggagttctaccacctcaggaacacaagtcctgaaa
tgccctgaagccaagtgtttcaggctgcgctgtgagtttgggccactgcatcgccaagag
agccggagtctgcagctgcatttccgagtctgggccaagaccttcttgcagcaggaatac
cagccgttcagccttcagtgtgaggctctatatgaagccctgaagatgccctaccaaatc
ctgcctcggcagctgccccaaaagaaactccaggtggccacagccgtgcagtggaccaag
gcagaaggcagcaatggcgtcccactgtggatcatcatcctcgccatcctttttggcctc
ctgctcctaggtctgctcatctatgtcctctacaagctcggcttcttcaaacgctccctc
ccctacggcacagccatggaaaaagctcagctcaagcctccagccacctcagatgcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (45)   

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