KEGG   Rattus norvegicus (rat): 315508
Entry
315508            CDS       T01003                                 
Symbol
Ncapd3
Name
(RefSeq) condensin-2 complex subunit D3
  KO
K11491  condensin-2 complex subunit D3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    315508 (Ncapd3)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin II
    315508 (Ncapd3)
SSDB
Motif
Pfam: Cnd1 HEAT Cnd3 HEAT_2 CLASP_N DUF3013
Other DBs
NCBI-GeneID: 315508
NCBI-ProteinID: NP_001029172
RGD: 1562176
Ensembl: ENSRNOG00000008932
UniProt: Q3T1H0
Position
8:33696214..33765520
AA seq 1494 aa
MALKDLGRDLQPWCPLDLSLEWVNTVWDLDFTETEPLDPSVVAEILETGRDAFTKLYGSL
FPFATDESGSLESVWSFFTENSISSNTLVALFCHFVQEAHKKSASVQYREYGLRAAGLYF
LLLEIPGSVVNQVFHPVMFDKCIQILKKSWPQESNLTQKRKKEHSKSSKANYRRSRKRGK
PPRKEDYQVDELSREEEEEEEEEIYFSVRDLSQIRDAIFNLLKNFLRLLPKFSLKEKPQS
IQTCIEVFVALTSFEPIPHKFLISQARNLSEVKHISELAYYGLYLLCSPVHGEGNKVIGS
IFHQMLNVILMLEVGEGSRCAPLAITSHVINCRNQAVQFVSSLVDELQESVFPILGTLLQ
HICAKVVDKAEYRTYAAQSLVQLLSKLPSKEYATFIAWLYKYSRSSKIPHRVFTLDVALA
LLELPERLLDDTVLLEHQKFLKHKFFVQEIIFDRCLDKAPTVRSKALSSFAQCLELSTSN
TSENTLEIFINSTVTGIHSHFGTSLRPSTVLTSQSCRSVQSSTHDSDEQTPPGERRFMTM
LRKRTKDEKINVRKSALQVLMSILKHCDILSMEEDLLILQDHCRDPAISVRKQALQSLTE
LVMAKPTCVPVQKAWLMGVIPVVMDYESTVQEKALECLDQLLLQNIKHHRKFHSEDRSQV
LAWALLALLTVESQDLSRYLNKAFHIWSKKDKFSSTFINSVISHTDTERSAPAWMLLSKI
TCSSPKLDYTKIMESWEKLSREQSPNSNTLGYMLCVIGHIAKHLPKSTQDKITGVIKAKL
NGFQWSLELISLSVDTLQGLCRASAKTLREEQELLKRVCGDVLSTCEQHLSNILLKEDGT
GNMDEDLVVKCIFTLGDIAQLCPALVEKRVFLLIQSILASSAHADHLPSSQGTTDLASQL
PFQARSSALPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNNVIIVMC
DLCIRYTVMVDNYIPNISICLKDSDPFIRKQTLILLTNLLQEEYVKWKGSLFFRFVSTLV
DSHPDIASLGEFCLAHLLLKRNPTMFFQHFIECIFHFNSYEKHGQYNKFSQSERGKPLFL
LKGKTNKEKRMRIYKFLLEHFTDEQRFNVTSKICLNILACFTDGVLPVDMEASELLSDTF
DILSSKEIKLLAMRAQASKELLEEDDVALANVVMQEAQMKIISQVQKRNFIENIIPIIIS
LKTVLEKNKIPALRELMNYLREVMQDYRDEIKDFFAVDRQLASELEYDMKKYTEQLAQEQ
ALTEHANATNVPADGDRVPSQQVAPDLQAVPGAAAAAGAGQADANMPLPLAQSQPSAPGS
SFTPTLPPICEKGPLKIMSSTRPMSLSTIAILNSVKKAVASKSRTRSLGALSFNMENGSP
ENPSSRASSLSLEQESERAVKRVTKRAISTPEKSISNVTFGAGVSYIGTPATSFFTKEKP
EEAQEEGNDILCLSLLDKRPPQSPQWNVKSPARSQDNPRSGRRSLRKAPLKTAN
NT seq 4485 nt   +upstreamnt  +downstreamnt
atggcgctgaaggatctaggaagagacctgcagccttggtgtccgctggatctcagcctt
gaatgggtgaacacagtgtgggacctggacttcacggagaccgaacctttggatcccagc
gtggtagcagagatcctagagactggaagagatgcgttcacaaagctctatgggagcctc
ttcccctttgcaaccgacgaaagtggctctttagagagcgtctggtccttcttcactgag
aacagcatttccagcaacactctggtggcgttgttctgtcactttgtccaggaagcccat
aaaaaaagtgccagtgtgcaatatcgagaatatggccttcgtgctgcggggctctatttc
ctgctgctagaaataccaggcagcgtagtcaatcaagtattccacccagtgatgttcgac
aagtgtattcagatcctgaagaagagctggcctcaagaatccaacttgactcagaagaga
aaaaaggaacactccaagagttctaaggctaattacaggaggagcagaaaaagaggaaaa
ccacctaggaaagaggattatcaggtggatgaactttcaagagaggaagaggaggaggag
gaagaggagatttatttttctgtccgggacctttctcaaatacgagatgccatatttaat
cttctaaagaattttttaaggcttctgcccaagttttctcttaaagaaaagccgcagtct
attcaaacatgtatagaggtgtttgttgcattaactagttttgaaccaattcctcataaa
tttcttatttcacaagccaggaacctcagtgaagtaaaacacatttcagagctggcctac
tatggattgtacttgctgtgctccccagttcatggagaaggaaataaggttatcggttct
atttttcatcaaatgctcaatgtgatactgatgttagaggtaggagaagggtcccgctgt
gctcctcttgccataacctcacacgtcatcaattgtagaaaccaagcagtccagtttgtc
agctcacttgtggatgaactacaagaaagtgtgttccccatccttggtactttactgcag
cacatctgtgccaaggtggtggataaagcagaatatcggacctacgcagcacagtccctg
gtccagctgcttagcaaacttccctccaaggaatatgctacattcattgcctggctttac
aaatattcacgaagttccaagatcccacaccgggtcttcactcttgatgttgctttagct
ctgttagagctgcccgaaagactgctggatgacactgtgctactggagcatcagaagttt
ctaaagcataaattctttgtgcaagaaattatatttgatcgttgcttagataaggcacct
actgtccgcagcaaggcgctgtccagctttgcacagtgtttggagttgtctactagcaac
acatctgagaacacactggaaatcttcattaacagtactgtgacaggaatacacagtcac
tttggcacctcactgagaccctcgacagtgttaaccagccaaagttgccgctcagtacaa
agcagcacccatgacagtgatgaacagactccgcctggagagagacgcttcatgacaatg
ctgagaaaaagaaccaaagatgagaagatcaacgttaggaagtctgcactccaggtgtta
atgagtattttgaaacactgtgacatcttgagcatggaggaggacctgttgatcctgcag
gaccactgtcgagaccctgccatatctgtgcggaagcaagccctacagtctcttacagaa
cttgtcatggccaagcctacttgtgtcccagtgcagaaggcctggctgatgggtgtcatc
cctgtggtgatggactatgagagcacagtgcaagagaaggccttggagtgcctggaccag
ctcctgctgcagaacattaagcaccataggaagtttcacagcgaggacaggagtcaggtg
ctcgcctgggccctacttgctctcctcaccgtagaaagccaagatctgagccgctattta
aataaggcttttcatatctggtccaagaaagataaattctcatccacttttataaacagt
gtgatatcccacactgacacagaacgttctgcgccagcctggatgctgctctccaagatc
acttgctcgtcacccaagctggactataccaaaataatggagtcgtgggagaaactcagc
agagaacaatctcccaactcaaacaccttaggctacatgctgtgtgtcattgggcatatt
gcaaagcatcttccaaagagcacacaggacaagataactggtgtgatcaaggccaagctg
aatggatttcagtggtctctagagctgatcagtttgtccgttgacacattacaagggctt
tgcagagcatctgcaaagacactgcgggaagagcaggaactgctgaagcgggtgtgtggg
gatgtcctctccacctgtgagcaacacctctctaacatccttctgaaggaagacgggaca
gggaacatggatgaagacctggtggtgaaatgcatttttaccctaggagatatagcccag
ttatgtccagccctagtagagaagcgagtcttccttctaatccagtctattctggcttct
tctgctcatgcggatcacttgccatcatctcaagggaccacagacctcgccagtcagctg
cctttccaggccaggagctctgccctgccgtctgtgattagagcacatgccatcatcact
ctgggtaaactctgcttacagcatgaagaccttgcaaagaaaagcatcccagcccttgtg
cgagaacttgaagtctgtgaggatgtggctgtccgcaacaatgtcatcattgtgatgtgt
gatctttgtatccggtacactgtcatggtggacaattatattcccaatatttccatttgc
ctgaaggattcagacccgttcatccgaaagcagacactgatcttgcttaccaacctctta
caggaggaatatgtgaagtggaagggctctctgttcttccgatttgtcagcactctggta
gactcacacccagacattgccagccttggggagttctgcctggctcacttgttgctgaag
aggaaccctaccatgtttttccagcacttcattgagtgcatattccacttcaacagctat
gagaagcatgggcagtataacaagttttcccagtcggagagggggaagccactgtttttg
ctaaagggaaagacaaacaaggagaagcgaatgagaatctacaagtttcttcttgagcac
ttcacagatgagcagcgattcaatgtcacttccaagatctgtcttaacattttggcgtgc
ttcacggatggcgtcctgcccgtggacatggaagccagcgagctgctctccgataccttt
gacatcctcagctctaaggagatcaaactattggcaatgagagcgcaggcatccaaggag
ctcctggaggaagatgacgtggctctggcgaatgtggtcatgcaggaggcccagatgaag
attatctcgcaggttcaaaagaggaatttcatagagaatattattccaatcatcatctcc
ctgaagactgtgctggagaaaaataagatccctgctttaagggaactcatgaactacctc
agggaagtaatgcaggattaccgcgatgagatcaaagacttctttgcagtggacagacag
ctggcgtctgagcttgagtatgacatgaagaagtacactgaacaactggcccaggagcaa
gctctgacggagcatgctaatgccaccaacgtgcctgcagacggggacagggtcccctcc
cagcaggttgctccagacttacaagctgtacctggcgctgctgccgccgctggtgctggc
caggccgatgctaacatgcctctgcctctggcccagagccagccttcagcacctgggtcc
agcttcacaccaactttgcctcctatatgcgaaaagggacctctgaagataatgtccagt
accaggcccatgtctctgagtaccatcgcaatcctgaattcagtcaagaaagctgttgcg
tctaagagcaggacacgcagtttaggagccctgtctttcaacatggagaacggaagccca
gaaaatccctccagccgtgcgtcttccttgagcttggagcaggagtctgagagagccgtc
aagcgtgtgactaaaagggcgatcagcaccccagagaagtccatcagcaatgtcacattt
ggagcaggggtcagttacatagggacaccagcaacttcgttttttaccaaagagaaacct
gaagaagcccaggaagaaggaaatgacattttatgtttgtcattgcttgataaaaggcct
ccgcagtctccacagtggaatgtgaagtctccagccaggagccaagacaacccccggtcc
ggcagaaggtcccttcgcaaggccccgctgaagacagccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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