KEGG   Rattus norvegicus (rat): 315554
Entry
315554            CDS       T01003                                 
Symbol
Pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
  KO
K01855  tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    315554 (Pus3)
Enzymes [BR:rno01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.45  tRNA pseudouridine38/39 synthase
     315554 (Pus3)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    315554 (Pus3)
SSDB
Motif
Pfam: PseudoU_synth_1 WD40_alt
Other DBs
NCBI-GeneID: 315554
NCBI-ProteinID: NP_001101604
RGD: 1310757
Ensembl: ENSRNOG00000012994
UniProt: A6JYL0 F6RES9
Position
8:42168194..42176527
AA seq 479 aa
MAETTDRNQIEKLLSRVKELEQEVERLKKEQANNIKDTSVRENSLGCGKAKRAFDFSAHG
RRHVALKIAYLGWGYQGFASQENTSNTIEEKLFEALIKTRLVESRQTSNYHRCGRTDKGV
SAFGQVISLDLRSQFPRSRDSEDSNLKDGADDIAKEIRYAHILNRVLPADIRVLAWAPAE
PSFSARFSCLERTYRYFFPCADLDIATMNYAAQKYVGTHDFRNLCKMDVANGVTNFQRTI
LSAQVQTVAQSPGEEGRQGPFQLCQFEVIGQAFLYHQVRCMMAILFLIGQGMEKPEIIDE
LLNIEKNPQKPQYSMAVEFPLVLYDCKFENTKWIYDHEVHEFNVTHLQQLWANHAVKTHM
LYSMLQGLDSVMVTCAAGTKTGEATEWRNIRPSVIKHTSAFVEGVRMRTYKPLMARPKCQ
GLESRIQHFVRRGRIEHPHLLHKEEKKAKRDCADKEENIVLENPTKRVCIIDAEINSIV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggctgaaaccacagacagaaatcagattgagaaacttctaagcagagtaaaggaactg
gagcaggaagtggaaagacttaagaaagaacaagccaacaatataaaagacacaagtgtc
agagaaaattctttaggctgtggaaaagctaagcgtgcttttgattttagtgctcatggc
cgtagacatgtagctctaaaaatagcctatctaggctggggataccagggctttgccagt
caggaaaacacaagcaataccattgaagagaaactgtttgaggctttaataaagacccga
ctagtagaaagcagacagacttccaactatcaccggtgtggtcgaacagacaaaggagtt
agcgcctttggacaggtaatttctctggacctgcgttctcagtttccaaggagcagggat
tcagaagattctaatttaaaagatggagctgatgatattgctaaagagatccgttatgct
cacattctcaatcgggtgcttcctgcagacatcagggtattggcctgggcccctgcagaa
cctagcttcagtgctaggtttagctgtcttgagcggacctaccgctactttttcccctgt
gctgatttagatattgcaactatgaattatgcagctcagaaatacgttggcactcatgat
ttcagaaacttgtgtaagatggacgtggccaatggcgtgactaattttcagaggactatc
ctgtctgcacaagtgcaaacagtggcccagagcccaggtgaggagggaaggcaagggcca
ttccagttatgtcaatttgaagtgattggccaggcattcctgtatcatcaagttcggtgt
atgatggctatcctcttcctgattggccaaggaatggagaagccagagattattgatgaa
ctgctgaacatagagaaaaatccccagaaaccgcaatatagcatggctgttgaatttcct
ctagtcttatatgactgtaaatttgaaaataccaagtggatttatgatcacgaggttcac
gaattcaatgttactcacctacaacagctatgggctaatcatgctgttaaaactcacatg
ctatatagtatgctacaaggactagactctgttatggtaacatgcgcagcaggaacaaag
actggtgaagcaacagaatggagaaacattcgaccctctgtcataaagcacactagtgcc
tttgtagaaggagtgagaatgcgcacatataagcccctcatggctcgccccaaatgccaa
ggactggaatcccggatccagcattttgtacgaagaggacgaattgagcacccacattta
ctccataaggaagaaaaaaaagcaaagagggactgtgctgacaaagaagaaaatattgtt
ttagagaatccaacgaagagggtttgtataatagatgcagaaattaacagcattgtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (12)   
   RefSeq(nuc) (6)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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