KEGG   Rattus norvegicus (rat): 315617
Entry
315617            CDS       T01003                                 
Symbol
Sidt2
Name
(RefSeq) SID1 transmembrane family member 2
  KO
K26112  SID1 transmembrane family member 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    315617 (Sidt2)
Membrane trafficking [BR:rno04131]
 Autophagy
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    315617 (Sidt2)
SSDB
Motif
Pfam: SID-1_RNA_chan
Other DBs
NCBI-GeneID: 315617
NCBI-ProteinID: NP_001101612
RGD: 1308311
Ensembl: ENSRNOG00000017871
UniProt: D3ZEH5 A0A0A0MP80
Position
8:complement(55129091..55146446)
AA seq 979 aa
MTSAGGRSPAVYRGAAPGGPEFCAASAALKGPASGKPTGQGHRRLGSPGASGRRVSSRAG
PGWGCGSRCRPREPGSARGPGAAPGRGRVLSQAGVKVLVPVRCWKLLRQPQRARSPSRRQ
PPPPRAMIAWRLPLCVLLVAAVESHLGALGPKNVSQKDAEFERTYADDVNSELVNIYTFN
HTVTRNRTEGVRVSVNVLNKQKGAPLLFVVRQKEAVVSFQVPLILRGLYQRKYLYQKVER
TLCQPPTKNESEIQFFYVDVSTLSPVNTTYQLRVNRVDNFVLRTGELFTFNTTAAQPQYF
KYEFPDGVDSVIVKVTSKKAFPCSVISIQDVLCPVYDLDNNVAFIGMYQTMTKKAAITVQ
RKDFPSNSFYVVVVVKTEDQACGGSLPFYPFVEDEPVDQGHRQKTLSVLVSQAVTSEAYV
GGMLFCLGIFLSFYLLTVLLACWENWRQRKKTLLVAIDRACPESGHPRVLADSFPGSAPY
EGYNYGSFENGSGSTDGLVESTGSGDLSYSYQGHDQFKRRLPSGQMRQLCIAMDRSFDPV
GARPRLDSMSSVEEDDYDTLTDIDSDKNVIRTKQYLCVADLARKDKRVLRKKYQIYFWNI
ATIAVFYALPVVQLVITYQTVVNVTGNQDICYYNFLCAHPLGNLSAFNNILSNLGYILLG
LLFLLIILQREINHNRALLRNDLYALECGIPKHFGLFYAMGTALMMEGLLSACYHVCPNY
TNFQFDTSFMYMIAGLCMLKLYQKRHPDINASAYSAYACLAIVIFFSVLGVVFGKGNTAF
WIVFSVIHIISTLLLSTQLYYMGRWKLDSGIFRRILHVLYTDCIRQCSGPLYTDRMVLLV
MGNIINWSLAAYGLIMRPNDFASYLLAIGICNLLLYFAFYIIMKLRSGERIKLIPLLCIV
CTSVVWGFALFFFFQGLSTWQKTPAESREHNRDCILLDFFDDHDIWHFLSSIAMFGSFLV
LLTLDDDLDTVQRDKIYVF
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgacgtcagcgggcgggcgcagccccgctgtttaccgcggcgcggcgcctggtggcccc
gagttctgtgccgcgtccgccgcccttaaagggcccgcgtccgggaagcctacgggccag
ggccaccgccgcctcggctctccgggcgcgagcggacgccgggtctccagccgggctggg
ccgggctggggttgcgggtcgcggtgccgcccacgcgagccggggtccgcgcgaggccca
ggagcggctccagggaggggacgcgtcctatctcaggccggggttaaagttctggtcccg
gtgagatgctggaagctgctgcggcagccgcaacgcgcccggtcgccgtcccgtcgccag
cccccgccgccccgggccatgatcgcctggcgtctgcccttgtgcgtgctcctggtggcc
gccgtcgagagccacctgggggctctggggcccaagaacgtctcgcagaaagacgcggag
tttgagcgcacctacgcggacgacgtcaacagcgagctagtcaacatctacaccttcaac
cacaccgtgacccgcaaccggaccgagggcgtgcgagtgtctgtgaacgtcctgaacaaa
cagaaaggggcgcctttgctgttcgtggtccgccagaaggaggctgttgtgtccttccag
gtgcccctaatcctgcgagggctataccagcgtaagtacctctaccaaaaagttgaacga
actctgtgtcagccccccaccaagaatgagtctgagatccagtttttctatgtggatgtg
tctaccctgtcaccagtcaataccacttaccagctccgagtcaaccgtgtggacaatttc
gtgctcaggactggggagctgtttaccttcaataccactgcagcccaaccccagtacttc
aaatacgagtttcctgatggtgtggactctgtcattgtcaaggtgacctccaagaaggcc
ttcccctgctctgtcatctccatccaggatgtcctgtgcccagtctatgatcttgacaac
aatgtagccttcatcggcatgtaccagacaatgactaagaaggcagccatcactgtgcag
aggaaagacttccccagcaacagtttttatgtggtggtggtggtgaagactgaggaccag
gcctgcggggggtccttgcccttctaccctttcgtggaagatgaaccagtggatcaaggg
caccgtcagaaaaccctgtcagtgctggtctctcaggctgtcacttctgaggcctacgtt
ggtgggatgctcttttgcctgggcatattcctgtcgttctacctgctgactgtgctgctg
gcctgttgggagaactggaggcaaaggaagaagaccttgctggtggccatagaccgagcc
tgcccagaaagcggtcaccctcgggtcttggctgattcgtttcctggcagtgccccctat
gagggttacaactatggctcctttgagaatggttccggatccactgacgggttggttgaa
agcacaggttcaggggacctctcctacagttaccaggggcacgaccagttcaagcggcgc
cttccctctggccagatgcggcagctgtgcattgccatggaccgctcctttgacccagtg
ggagctcggccacgactggactccatgagctccgtggaagaggatgactatgacacactg
actgacatcgactcagacaaaaacgtcattcgaaccaagcaatacctctgtgtggctgat
ctggcacgaaaggacaaacgtgttttacggaaaaagtaccagatttacttctggaacata
gccaccattgcagtcttctacgcccttcctgtggtgcagctggtgatcacctaccagacg
gtggtgaatgtcacggggaaccaggacatctgctactacaacttcctctgtgcccaccca
ctgggcaacctcagcgccttcaacaacatcctcagcaacctggggtacattctgcttggt
ctgctcttcctgctcatcatcctgcagcgggagatcaatcataaccgggccctgctgaga
aatgacctctatgctctggagtgtgggatccccaaacactttggtctattttatgccatg
ggcacagcgttgatgatggaggggctactgagtgcctgttaccacgtctgccccaactac
accaacttccagttcgatacctcgttcatgtacatgattgctggcctctgcatgctgaag
ctctaccagaagcggcacccagatatcaacgccagcgcctacagcgcatacgcctgcctg
gccattgtgatcttcttctccgtcctgggtgtggtttttggcaaagggaacacagccttc
tggatcgtcttctcagtcatccatatcatttccacgcttctcctcagcactcagctgtat
tacatgggccgctggaagctggactccggaatcttccgccgcatccttcatgtgctctac
acagactgcatccggcagtgcagcgggcccctttacacggaccgcatggtgcttctggtc
atgggcaacattatcaactggtcgctggctgcctacggactcatcatgcgcccaaatgac
tttgcgtcctacttgctggcaattggcatctgcaacttgctgctgtattttgctttctac
atcattatgaagctccggagcggcgagaggatcaagctcatccctctgctctgcatcgtg
tgcacctccgtggtctggggcttcgcactcttcttcttcttccagggactcagcacgtgg
cagaaaacccccgcagagtccagggagcacaaccgagactgcatcctccttgacttcttt
gatgaccacgacatctggcacttcctgtcctccattgctatgtttgggtccttcctggtt
ttattgacgttggatgacgacttggacactgtacagcgggacaagatctatgtcttctag

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (41)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (1)   
   Pfam (1)   
All databases (68)   

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