KEGG   Rattus norvegicus (rat): 315804
Entry
315804            CDS       T01003                                 
Symbol
Rfx7
Name
(RefSeq) DNA-binding protein RFX7
  KO
K09175  DNA-binding protein RFX7
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    315804 (Rfx7)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Other basic domains
   RF-X
    315804 (Rfx7)
SSDB
Motif
Pfam: RFX5_N RFX_DNA_binding Pox_D5 Cdc6_C TIG_plexin
Other DBs
NCBI-GeneID: 315804
NCBI-ProteinID: NP_001120962
RGD: 1308795
Ensembl: ENSRNOG00000060367
UniProt: E9PT49
Position
8:82134747..82219898
AA seq 1459 aa
MAEEQQQPPPQQLDAHQQLPLSAPNPGVALPALVPGLPGTEASALQHKIKNSICKTVQSK
VDCILQEVEKFTDLEKLYLYLQLPSGLSSAEKSDQNAMSSSRAQQMHAFSWIRNTLEEHP
ETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLR
KKAFVHMPTLPNLDFHKTGDGLEGVEPSGQLQNIDEEVISSACRLVCEWAQKVLSQPFDT
VLELAHFLVKSHYIGTKSMAALTVMAAAPAGLKGISQPSAFIPTAESNSFQPQVKTLSSP
IDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKTEGTTANGVANLPNGNPAILSPQPIGIV
VAAVPSPIPVQRTRQLVTSPSPMNSSDGKVLPLNVQVVTQHMQSVKQTPKTPQNVPASPG
GDRSARHRYPQILPKPANTSALTIRSPTTVLFTSSPIKTAVVPASHMSSLNVVKMTTISL
TPSNSNAPLKHSASVSNATGTTEDSRSIPQIKNGSVVSLQSPGSRASSTGGTSAVEVKME
PEGSSDEHPLQCQENAEGTKAPLATSSALWGQKSNTDGTVSKPSNEGVTEVKTTKVCDQR
AKCKSRCNETLPGISAGNNQSTVTLSVATQNLPFTSTSSPSNGDSVNKDPKLCTKSPRKR
LSATLQESQVPPVKKPIVEQLSAVTTEGQKPGTVKKDQKVPHSGKTESSTAGAQPPNKVS
LSVSSHIVEDQPLNPTLVASESALEQQTTPSSSPDVKVKLEGSVFLLDRESNSDGSFNRN
EWQQVTKDSDFISASCEQQQDISVMTIPEHPDIHDLEKSVWELEGMPQDTYSQQLHSQIP
ESSLNEIQAQSSDQLPLQSELKEFESSVSQTNESYFPFDDELTQDSIVEELVLMEQQMSM
NNSHSYGNCLGMTLQSQSVTPGAPMSSHGSSSHFYHPIHSNGTPIHTPTPTPTPTPTPTP
TPTPTSEMIAGSQSLSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVEC
RNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYGGVGNSSVSGH
GILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRLTPVSPVQHQGATVNTNKQE
GFAVPAPLDNKGTNSSASSNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRSNVTPFGSPVT
PEVHVFTNVHTDACANNIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSKLDSDN
DDAVRGLGMNNVPSNYTARMNLTQILETSPVFPSANSQNMIDSSTSVYEFQTPSYLTKSN
STDQISFSPGDNQAQSEIGEQQLDFNSTVKDLLSGDNLQTSQQLGGQVASDLTNTASDFP
SDIRLSSDLSGSINDLNTLDPNLLFDPGRQQGQDDEATLEELKNDPLFQQICSESMNSMT
SSGFEWIESKDHPTVEMLG
NT seq 4380 nt   +upstreamnt  +downstreamnt
atggcagaggaacaacaacagccgccaccacagcagctcgatgcccatcagcagcttccc
ctcagcgcccccaaccccggggtggctctgccagcccttgtgcccgggctgccagggaca
gaggccagcgctctgcaacacaagatcaagaactccatctgcaaaactgtacaatctaaa
gtggactgcattttgcaagaagttgagaagtttacagacctagagaaactctacctctac
cttcaactgccttctggtctcagcagtgcagagaaaagtgatcagaatgccatgtcatct
agccgggcacagcaaatgcatgccttttcctggattcgaaataccttagaggagcatcct
gagacttcactccccaaacaagaagtctatgatgaatacaagagctattgtgacaatctt
ggctaccatccattaagtgctgctgactttggaaaaatcatgaagaacgtctttccaaac
atgaaggcacgccgtttgggcactagaggcaaatctaaatattgctacagtggactaagg
aaaaaagcttttgttcatatgccaacactgcccaaccttgactttcataaaactggagat
gggttggaaggagttgaaccatctgggcagcttcaaaatattgatgaggaagttatctct
tctgcttgccgtcttgtgtgtgagtgggcccagaaagtgttaagccagccatttgacaca
gtcttggaattagcccacttccttgtaaagagtcattatataggcaccaagtcaatggca
gctctgactgtgatggcagcagcaccagcaggacttaaaggaatttcccagccttctgct
tttatacctacagctgaaagtaattcctttcaacctcaagtaaagactttgtcatctcca
attgatgctaaacagcagttgcaacggaaaattcaaaaaaagcagcaagaacagaaacta
cagtccccattaccaggagaatcctcagcaaaaaaaacagaaggcactacagccaacgga
gtggctaatctacccaatgggaaccctgcgatcctttctccccagcccattgggattgtg
gtagcagctgtccctagtcccattccggtccagcggacgaggcagttagtaacttcaccc
agtccgatgaattcttctgatggcaaggttcttcccctcaacgtgcaggtagtcactcag
cacatgcagtctgtgaaacagacaccaaagactcctcagaacgtcccagccagtcctggt
ggggaccgttctgccaggcaccgctaccctcagatcttacccaagccagcaaacaccagt
gcgctcaccatccgctctcctacgactgtgctgtttaccagcagtcccatcaaaactgct
gtggtacctgcgtcacacatgagttctctaaatgtggtgaaaatgacaacaatatccctc
acacccagtaacagtaatgcgcctcttaaacattctgcctccgtcagcaatgctactgga
acaacagaggactccaggagcatccctcagatcaagaatggttctgttgtttctctccag
tcccctgggtccagggccagcagcactgggggaacctctgctgtggaagtcaaaatggaa
ccagaaggttcatcagatgagcatcctctgcagtgccaagagaacgctgaggggactaaa
gctcctctggccacatctagtgccctttggggacagaaaagtaatacagatggaacagta
tcaaaaccttctaatgaaggagtcacagaagtgaaaacaactaaggtctgtgaccagagg
gccaagtgtaaaagtcgctgtaatgaaactctgccaggcatctcagcaggcaataatcaa
agcactgttactctctcagttgctactcagaacttacccttcaccagcaccagctcacca
tctaatggtgactcagtaaataaagaccctaaattatgcactaaaagtccaagaaaacga
ctgtctgctacactgcaagagtctcaggtgcctcctgtaaagaaaccaattgtagaacag
ctttctgcagttactaccgaaggtcagaaaccaggcactgttaaaaaggaccaaaaggtt
ccacattcagggaaaacagaaagctcaacagcaggtgctcagcctcctaacaaggtgtca
ctcagtgtcagctcacacattgtagaggatcagcccttgaaccctactcttgtcgccagt
gaatcagctctggagcagcagacaacgccatcatcgtctccggatgtaaaagtaaaactt
gaagggagtgtctttcttttggaccgtgagtcaaactcagatggcagctttaatcgtaac
gaatggcaacaagttactaaggattctgacttcatatctgccagctgtgagcaacagcaa
gacattagtgtgatgacaattcctgagcatcctgacatccatgatttagagaagtctgtt
tgggaattagaagggatgccacaggacacatacagccagcagctccatagccagatacca
gaatcttctctgaatgaaatacaagcacagtcttcagatcagttaccgttgcagtcggaa
ctgaaagagtttgagtcttctgtttcccagacaaatgaaagctactttccttttgatgat
gaacttacacaagatagcattgtggaagagctggtgcttatggagcagcagatgtcaatg
aataactcccattcttatggtaactgcttgggaatgacccttcagagtcagtcagtaact
ccaggagctccaatgtcatctcatggttccagctctcacttctatcatccaatccatagc
aatggcactccaattcacacacctacacccacacccactcctacaccaactccgacccca
actccaaccccaacatctgaaatgattgctgggtctcagagtctgtcacgggagagccct
tgttccaggcttgcccagacaacacctgtggatagtgctttaggaagtagccgacacaca
cccattggtactcctcattctaattgcagcagtagcgtccctccaagccctgttgaatgc
aggaatccatttgcattcaccccaataagctccagtatggcatatcacgatgccagcatt
gtctcaagcagtcctgtaaaaccaatgcaaagacccatggccactcaccctgataaaacc
aagcttgaatggatgaataatgggtatggtggggttggtaactcatcagtttctggtcac
ggcattctcccaagctatcaggaactagtagaagatcgtttcaggaaacctcatgctttt
gctgtgcccggacagtcgtatcagtctcagtccagacaccatgacactcattttggtcgt
ttgactcccgtctctcctgtgcagcatcaaggtgccactgtaaacaccaacaagcaagaa
gggtttgcagtccccgctcctcttgataataaaggaactaattcatctgccagcagcaac
ttcaggtgccggagtgtaagccctgctgtccatcgccaacggaatcttagtggaagcacc
ctctatcctgtgtctaatatcccacggtctaatgtaaccccctttggaagtccagtgacc
ccagaagttcatgttttcacaaatgttcacacagatgcatgtgccaacaacatagctcaa
agaagtcagtcagttccattaacagtcatgatgcagacagccttccctaatgctctgcag
aagcaaacaaacagtaaaaaaatcactaatgttttgttgagtaaactcgattctgacaat
gatgatgcagtgagaggtttgggaatgaacaacgtgccctccaattacacagcccggatg
aatctcactcagattttggaaacttcccctgtttttcctagtgccaattcacaaaatatg
atcgattccagcacttctgtttatgaattccaaacaccatcttacctcaccaaaagtaat
agcaccgatcagatcagtttttctcctggagataatcaagcacaatctgaaattggagaa
cagcagttagatttcaatagcactgttaaagacctgttgagtggagacaacctgcaaacc
agccagcagctgggaggtcaggtagcatctgatctcaccaacactgcatctgatttccct
agcgacatcaggttgtcttctgacctctcaggcagcatcaatgatttgaacaccttagac
ccaaatctactgtttgatccaggtcgtcagcagggacaggatgatgaagccacactggaa
gaattaaagaatgacccactgtttcaacagatttgcagtgagtcaatgaactctatgact
tcatcaggttttgaatggatagaaagcaaggaccatcctactgttgaaatgttgggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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