KEGG   Rattus norvegicus (rat): 315912
Entry
315912            CDS       T01003                                 
Symbol
Tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B
  KO
K19951  TBC1 domain family member 8/9
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    315912 (Tbc1d8b)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    315912 (Tbc1d8b)
 Endosome - Golgi transport
  Rab GTPases and associated proteins
    315912 (Tbc1d8b)
SSDB
Motif
Pfam: RabGAP-TBC GRAM EF-hand_1
Other DBs
NCBI-GeneID: 315912
NCBI-ProteinID: NP_001388066
RGD: 1563084
Ensembl: ENSRNOG00000054011
Position
X:108107796..108195744
AA seq 1118 aa
MWLKPEEVLLKNALKLWLMERSNEYFVLQRRRGYGEEGGGGLTGLLVGTLDSVLDSTAKV
APFRILHQTPDSQVYLSIACGANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGKIR
GLIAEEGKQSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWRGRVPCQGWLYL
STNFLSFYSFLLGSEIKLIISWDAISKLEKTSSVIVAESIHVCSQGENHYFSMFLHINET
YLLMEQLTNYAIKRLFDKETFDNDPVLDDPLQITKRGLEYRAHSEQFKAFFRLPKEETLK
EVHECFLWVPFSHFSTHGKMCISENYICFASQDGNLCSVIIPLREVLAVDKTDDSSRSVI
ISIKGKTAFRFNEVKDFEQLVAKLRLKCRAASTQDDGSTEVAISSDSTGLSENFEEQPLT
FPKECSKTVNTEALMTVFHPQNLENLDSKMLKEKMKEQSWNILFSECGRGVSMFRTKKTR
DLVVRGIPETLRGELWMLFSGAVNDMAANPGYYAEVVEQSLGTSNLATEEIERDLRRSLP
EHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVAVCER
MLPDYFNRRIIGALVDQAVFEELIRDHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPIE
SAVNVVDCFFYDGIKAILQLGLAILDYNLDKLLTCKDDAEAVTALNRFFDNVINKDSPLP
SNVQQGSNINDGKSNHAKVDITDLIRESNEKYGSIRYEDIHSMRCRNRLYVIQTLEETTK
QNVLRVVSQDVKMSLQELDELYVIFKKELFISCYWYLSCPGLKHHDPSLSYLEQYQIDCQ
QFRVLFHLLCPWAHSANRDSLALWTFRLLDENSDCLINFKEFSSAIDIMYNGSFTEKLKL
LFKLHIPPAYTEVISKTSSKGDELSTEELLYFSQLQVSKPADGKETELGRKSPEKGKGKI
DIQAYLSQWQDELLKKEENIKDLPRMNQSQFIQFSKTLYNLFHEDPEEEALYQAIAIVTN
LLLRMEEVGRKLHSPASSAKGLSSVACDSGPSEGNTESSVKKDPSSPREEHQWSFAFEQI
LASLLNEPALVRFFERPLDLKAKLEKAKSSQLRSRTKM
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgtggctgaagcccgaggaagtgttgttgaaaaatgcgctgaagctgtggctgatggaa
agatccaacgagtactttgtcctgcaaaggcggcgaggctacggggaagaaggcggagga
ggacttacaggtcttttggttgggactcttgattccgtcttagactctactgctaaggta
gctccgtttcgcatcctacaccagacaccagattctcaagtgtacttgtcaattgcatgt
ggagccaacagagaagaaataacaaaacattgggactggttggaacaaaatatcatgaag
actttatctgtgttcgattcaaatgaagatattactaattttgtacaaggcaaaataaga
ggactaattgctgaagagggaaaacaatcttttgctaaagaagatgatcctgagaaattt
cgagaagcccttttgaaatttgaaaaatcttttggtttaccagagcaggagaaactagta
acttattattcttgcagttactggagaggacgggttccttgtcagggttggctctatcta
agtaccaactttctgagcttctattctttcttgctaggatcagaaattaaactcataatc
tcctgggatgcaatctcaaaacttgaaaagacttcaagtgttatagtagcagagagtatt
cacgtatgttctcaaggagagaaccactatttctcaatgtttttacacatcaatgaaacc
taccttcttatggaacagctgacaaactatgccataaagagactttttgataaggaaaca
tttgataatgacccagtccttgatgatcctctacagattaccaaaagaggtttggaatat
cgagcccacagtgagcaattcaaagccttttttaggctacccaaagaagaaactttgaaa
gaagtacatgaatgttttttatgggtaccattcagccacttcagtactcatggaaaaatg
tgcatttcagaaaactatatttgctttgctagccaggatgggaatctatgtagtgttatc
attccattacgagaggttttagctgtagataaaactgatgactccagcagatccgtcatc
attagcatcaaaggaaaaacagcttttcgtttcaatgaggttaaagactttgagcaactg
gtggcaaagctcaggctcaagtgccgggcagcttcaactcaagatgatggtagcacagag
gttgctattagttctgactctacaggcctatctgagaattttgaggaacaacctttgaca
tttccgaaggaatgcagtaaaactgtgaacactgaagccttaatgacagtatttcaccct
caaaatttggaaaatcttgattctaaaatgttaaaggaaaagatgaaggaacaatcatgg
aacatcttattttcagaatgtggtcgtggggttagcatgttccggacaaaaaagactcga
gacctggttgtaagagggattccagagactttaagaggggagctctggatgcttttctca
ggtgctgttaatgacatggcagctaaccctggctattatgctgaagtggttgaacaatcc
ttagggacctccaacctggcaactgaagaaattgagcgtgatttgcgtcgctccctgcct
gaacacccagcatttcagagtgatactggcatatctgctctgaggcgggtactgacagct
tatgcatataggaatcccaaaataggatactgccaggcaatgaacattttgacttcagta
ttgctcctatatgcaaaagaagaagaagctttttggcttctggttgctgtatgtgaacga
atgttgccagattattttaatcgtcgaatcattggtgccttggtggatcaggcagtgttt
gaagaactaatcagggatcaccttcctcagctgacagaccacatgaccgacatgactttc
ttttcctcagtttctctctcgtggttcctcacgcttttcattagtgtgcttcctattgaa
agtgcagtgaatgtggtggactgtttcttctatgacggaatcaaagccattttacaactg
ggattggcaatactggactataatttagacaaacttctgacatgtaaagatgacgctgaa
gctgtgacagcactaaacaggttctttgacaatgtcattaataaggatagcccattgcct
tcaaatgttcagcagggttcaaatatcaatgatggaaaaagcaatcatgctaaagtggat
attacagatttgattagagagtccaatgagaaatatggtagtattcgctatgaagatata
catagcatgcgctgtcgaaataggttgtatgtgatacagaccctggaggaaacaacaaag
cagaatgtgttgcgtgttgtatcacaagatgtgaaaatgagccttcaggaattggatgaa
ctttatgtcatttttaagaaagagctgttcatatcttgttattggtatttgagttgtcca
ggactgaagcatcatgaccccagcctgtcatatttggaacaatatcagattgactgccag
caattcagagtattgtttcacttgttgtgtccctgggctcattctgcaaacagagactct
ctagctttgtggacattcagattgttggatgagaactctgattgccttataaacttcaaa
gaattctcctctgcaatcgatataatgtacaatggaagttttactgagaagctcaagctg
ctttttaagctgcatattcctccagcttatactgaagtgatatctaagacttcttcaaaa
ggtgatgagctttcaacagaagaattactttatttcagtcagctccaagtttctaagcct
gcagatgggaaggaaacagaattgggaagaaaaagccctgagaaaggcaaaggaaaaatt
gatattcaagcctatttaagtcaatggcaagatgaacttctcaaaaaagaagagaacatt
aaagatttaccaagaatgaatcagtcacaatttattcagttttcaaagaccctgtataat
ttatttcatgaggaccccgaagaagaggcgctatatcaagccattgctattgtaaccaac
cttcttctcaggatggaagaagttggaaggaaactccatagcccggcgtcatcagccaaa
ggactgtccagtgtagcctgtgattctggacccagtgagggaaacacagagagcagtgtg
aagaaagatccttcctctcccagagaagaacatcagtggtcctttgcattcgagcagatt
cttgcttccctgttaaacgaaccggccctggtgaggttttttgagagacccttagattta
aaagccaagctagaaaaggcgaaaagctcccagttaaggtctagaaccaagatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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