KEGG   Rattus norvegicus (rat): 315953
Entry
315953            CDS       T01003                                 
Symbol
Cldn18
Name
(RefSeq) claudin-18 precursor
  KO
K06087  claudin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04514  Cell adhesion molecules
rno04530  Tight junction
rno04670  Leukocyte transendothelial migration
rno05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    315953 (Cldn18)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    315953 (Cldn18)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    315953 (Cldn18)
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    315953 (Cldn18)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    315953 (Cldn18)
   04147 Exosome [BR:rno04147]
    315953 (Cldn18)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Stereociliary proteins
   315953 (Cldn18)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   315953 (Cldn18)
  Exosomal proteins of colorectal cancer cells
   315953 (Cldn18)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2
Other DBs
NCBI-GeneID: 315953
NCBI-ProteinID: NP_001014118
RGD: 1359696
Ensembl: ENSRNOG00000030386
UniProt: Q5I0E5
Position
8:complement(109125819..109145110)
AA seq 261 aa
MATTTCQVVGLLLSLLGLAGCIAATGMDMWSTQDLYDNPVTSVFQYEGLWRSCVQQSSGF
TECRPYFTILGLPAMLQAVRALMIVGIVLGVIGILVSIFALKCIRIGSMDDSAKAKMTLT
SGIMFIISGVCAIIGVSVFANMLVTNFWMSTANMYSGMGGMVQTVQTRYTFGAALFVGWI
AGGLTLIGGVMMCIACRGLTPDDRNFKAVSYHASGQNVAYKPGGFKASTGFGSNARNKKI
YDGGARTEDDEQSHPTKYDYV
NT seq 786 nt   +upstreamnt  +downstreamnt
atggccaccaccacgtgccaggtggtagggctcctcctgtccctcctgggtctggccggc
tgcatagccgccactggaatggacatgtggagcactcaggacctgtatgataacccagtc
acctccgtgttccagtatgaagggctctggaggagttgcgtgcaacagagctcggggttc
actgagtgccggccatacttcaccatcctgggccttccagccatgctgcaagcagtgcga
gccctgatgatcgtgggcattgttctgggggtcatcggcatcctggtgtccatcttcgcc
ctgaagtgcattcgcattggcagcatggatgactctgccaaggccaagatgactctgact
tctgggattatgttcatcatctcaggagtctgtgcaatcattggtgtgtctgtgtttgcc
aacatgctggtaaccaacttctggatgtccacggccaacatgtacagcggcatgggtggg
atggtgcagaccgttcagaccaggtacacttttggtgcagctctgtttgtgggctggatc
gctggaggcctcacactaattggaggtgtgatgatgtgcattgcttgccgtggcctgact
cctgatgaccgcaacttcaaagccgtgtcctaccacgcttctggccaaaatgttgcctat
aagcctggaggctttaaggccagcactggctttgggtccaacgccagaaacaagaagata
tatgatgggggtgcccgcacagaagacgatgaacaatctcatcctaccaagtacgactat
gtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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