KEGG   Rattus norvegicus (rat): 315996
Entry
315996            CDS       T01003                                 
Symbol
Sema3f
Name
(RefSeq) semaphorin-3F precursor
  KO
K06840  semaphorin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    315996 (Sema3f)
SSDB
Motif
Pfam: Sema Ig_3 I-set PSI ig Ig_2 Ig_6 V-set VP4_haemagglut
Other DBs
NCBI-GeneID: 315996
NCBI-ProteinID: NP_001400759
RGD: 1308514
Ensembl: ENSRNOG00000017704
UniProt: A6I309 D3ZGX9
Position
8:complement(117236269..117265206)
AA seq 785 aa
MLVTGFILWASLLTGAWPAAPIQDQLPATPRVRLSFKELKATGTAHFFNFLLNTTDYRIL
FKDEDHDRMYVGSKDYVLSLDLHDINREPLIIHWAASPQRIEECILSGKDGNGECGNFVR
LIQPWNRTHLYVCGTGAYNPMCTYVNRGRRSQAPPWTQMQVVRGRGSRATDGADRPTPTA
PRQDYIFYLEPEKLESGKGKCPYDPKLDTASALINEELYAGVYIDFMGTDAAIFRTLGKQ
TAMRTDQYNSRWLNDPSFIHAELIPDSAERNDDKLYFFFRERSAEAPQNPAVYARIGRIC
LNDDGGHCCLVNKWSTFLKARLVCSVPGEDGIETHFDELQDVFVQQTQDVRNPVIYAVFT
SSGSVFRGSAVCVYSMADIRMVFNGPFAHKEGPNYQWMPFSGKMPYPRPGTCPGGTFTPS
MKSTKDYPDEVINFMRTHPLMYQAVYPLQRRPLVVRTGAPYRLTTVAVDQVDAADGRYEV
LFLGTDRGTVQKVIVLPKDDQEVEELMLEEVEVFKEPAPVKTMTISSKRQQLYVASAVGV
THLSLHRCQAYGAACADCCLARDPYCAWDGQACSRYTASSKRRSRRQDVRHGNPIRQCRG
FNSNANKNAIESVQYGVAGSAAFLECQPRSPQATVKWLFQRDPSDRRREIRAEDRFLRTE
QGLLLRALQLGDRGLYSCTATENNFKHVVTRVQLHVLGRDAVHAALFPPLAVSVPPPPGT
GPPTPPYQELAQLLAQPEVGLIHQYCQGYWRHVPPNPREAPGALRPPELQDQKKPRNRRH
HPPDT
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcttgtcactggcttcatcctctgggcttccctgctgactggggcctggccagctgcc
cccatccaggaccagcttccagccacacccagagtccgactatctttcaaagaacttaag
gccacaggtactgcccacttcttcaactttctgctcaacactacagactacagaatcctg
ttcaaggacgaggaccatgaccgcatgtatgtgggcagcaaggactacgtgctgtccctg
gacctgcatgacatcaaccgagagccccttattatccactgggcagcctccccacagcgc
attgaggagtgcatattgtcaggcaaggatggcaacggagagtgtgggaacttcgtcaga
ctcatccagccctggaaccggacacacctgtacgtgtgcgggaccggtgcctacaacccc
atgtgcacctatgtgaaccgtggccgtcgctcacaggccccaccgtggacccagatgcag
gtggtcagaggccgaggcagcagggccacagatggtgccgaccgcccgacgcccacagcc
ccacgccaggattacatcttctacctggagcctgagaaacttgagtcagggaaaggcaaa
tgcccatacgaccccaagctggacacggcctcagccctcatcaatgaggagctctacgca
ggagtgtacatcgattttatgggcactgatgcagccattttccgtacgcttggaaagcag
acagccatgcgcacagatcagtacaactcccggtggctcaatgatccttcattcatacat
gctgagctcatccctgacagcgctgagcgcaacgacgataaactctacttcttcttccga
gagcgctctgcagaggctccgcagaaccctgcggtgtacgcccgcatcgggcgcatctgc
ctcaacgatgacggtggccattgctgcctggtcaacaagtggagcacattcctgaaggca
cggctcgtctgctctgtgccaggcgaggatggcattgagacccacttcgatgaactccag
gacgtgtttgtccagcagacccaggacgtcaggaacccagtcatttatgctgtcttcacc
tcttcaggctctgtgttccgaggatctgcagtgtgtgtctactctatggctgacatccgc
atggtcttcaatgggccttttgctcacaaggagggccccaactaccagtggatgcctttc
tcaggaaagatgccgtatccccggcctggcacatgccctggtggaacctttacgccatcg
atgaagtccaccaaggactatcctgatgaagtgatcaacttcatgcgtactcatccactc
atgtaccaggccgtctacccgctgcagcggcgccccctggtggtccgtacaggcgctccc
taccgcctcaccactgtcgctgtggaccaggtggatgcagctgatggacgctatgaggtg
cttttcctgggcacagaccgcgggacagtgcagaaggtcatcgtgctgcccaaggatgat
caggaggtggaagagctcatgttagaggaggtggaggtcttcaaggagccagcacctgtt
aaaactatgaccatctcttccaagaggcaacaactgtatgtggcctccgccgtgggcgtc
acacacctgagcctgcaccgctgtcaggcctatggagctgcctgtgctgactgctgcctc
gcccgagatccctactgtgcctgggatggccaggcctgctctcgctacacagcatcctcc
aagaggcggagtcgccgacaagatgtccgccacgggaaccccatcaggcagtgccgtggt
ttcaattccaatgcaaacaagaatgccatagagtctgtgcagtacggcgtggccggaagt
gcggctttccttgagtgccagcctcggtcacctcaagccactgttaagtggcttttccag
cgagatcccagtgatcggcgtcgtgagattcgcgcagaggaccgcttcctgcgcacagag
caggggctgttgcttcgcgccctgcagcttggtgaccgcggcctctactcctgcacggcc
actgagaacaacttcaagcacgtcgtcacgcgggtacagctgcatgtactgggccgggac
gccgtccatgctgccctcttccccccactggctgtgagcgtccctccacctcctggcaca
ggccctccaacacctccttaccaggagctggcccagctcctagcccaaccggaagtgggc
ctcatccatcagtactgccagggttactggcgccatgtgccccccaaccccagggaggct
ccaggagctctcaggcctcctgaactccaggaccagaaaaagccgaggaaccgccgccac
catcctccggacacatga

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