KEGG   Rattus norvegicus (rat): 316017
Entry
316017            CDS       T01003                                 
Symbol
Als2cl
Name
(RefSeq) ALS2 C-terminal-like protein isoform X1
  KO
K26227  ALS2 C-terminal-like protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    316017 (Als2cl)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    316017 (Als2cl)
SSDB
Motif
Pfam: VPS9 MORN RhoGEF
Other DBs
NCBI-GeneID: 316017
NCBI-ProteinID: XP_038938579
RGD: 1305208
Ensembl: ENSRNOG00000033921
Position
8:119746498..119762824
AA seq 952 aa
MCSSEETDLLRLEEVFSTTLARTISLILQPLLLADPEPSDPCGKECLRLLQQLHESAQRL
WDVTEQSLLSLRQRLYHPPSMSLEAVLLLNNADYVLQAHMEYIKSYTDCLVVQAFQKVSK
KRSEFWRSQRKALRQLLSSGSSEGSVGTTLCQALRQPLAHHVQKYVLLLLSLRDTLDEHH
PAQQLVMHAVTLFGNLQSFMQQALDQAMATQALWHSLSSRLRDVLCTPTHRLLQDSQDIP
VVVTPLRAERVLLFDDTLVLLQGHNVHTFDLKLVWVDPSQDKCVLHILTPEDEFSFCTRD
PQGQVVWQWKVTQAVCQALCGKKDFPVLGSGREPSVPPECRCLAYTFHREGRLYQATYDG
EWSRAKPHGKGTLKWPDGRNHVGDFYQGLEHGFGICLVPQASEDKFDCYKCHWREGRMCE
YGICEYGTDEVYKGYFQAGVRHGFGVLDSAPQAPQPFRYTGHWERGQRSGYGIEEDRDRG
ERYIGMWQADQRHGPGIVVTQAGVCYQGTFQGDKMAGPGILLCEDDSLYEGTFTRELTLL
GKGKVTFPNGFTLEGSFCSGTDKGLYTQGVLDTTALPPNPSSTRKRQLGLGAFPVESRWQ
GVYSPFRDFLRLGCPGELQEALLGFHVQSSRELRKSQEYLCCERSHPKDCVGSMEDILKE
LLQHRKPKALQQYLRKALSNSRHPLGKLLQTLMLTFQATYSGIGANKHLQAMAQEEVKQH
ARELWAAYRGLLKVALLRQGQTLEEESMETRDLQVHGLLLPLLLPSFYSELFTLYLLLHE
REDGLYSRGIANLSLFPDTKLLEFLDVQKHLWPLKDLRLTSNQRYSLVRDKCFLSATECL
QKIITTVDPREKLEVLEKTYGEIEATVSRVLGREYKLPMDDLLPLLIYVVSRARIQHLGA
EIHLIRDMMDPIHTGGLHDFLLTALESCYEHIQKEDMRLHHLPGHWDARELW
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgtgtagctctgaggagacagacctgcttcggctggaggaggtcttctcaaccactctt
gctcgaaccatcagtctcatcctgcagcctctgctcttagctgacccggaaccctcagat
ccctgtggcaaagagtgccttcggcttctgcagcagctgcatgagagtgcccagcggttg
tgggatgtgacagagcagagcctgctttctctgaggcagaggctatatcacccaccttcc
atgagtctggaggccgtcctgttactgaacaatgctgactatgtcctacaggcccacatg
gagtacatcaaatcctatactgactgcctggtggtgcaagcctttcagaaggtctccaag
aaaaggagtgagttctggagaagtcagcgcaaggccctgcggcagctgctgtcctccggg
agctctgagggctccgtgggcaccacgctgtgccaggccctccgccagccactcgcccac
cacgtgcagaaatacgtgctcctccttctgagcctcagggacacccttgacgagcaccac
ccagcccagcagctggtgatgcatgcagttaccctgtttggaaacctgcagtccttcatg
caacaggccttggaccaagccatggccacacaggccctgtggcacagccttagcagccgg
ctgagggatgtgctctgtaccccgactcaccgcctcttacaggacagccaggacatccct
gtggtggtcaccccactgcgggctgagcgcgtgctgctctttgatgatacccttgtcctg
ctgcagggccacaatgtccacactttcgacctgaagttggtgtgggtggaccccagccaa
gacaagtgtgtgctccacatcctcactcctgaagacgagttctccttttgcaccagagac
ccccaaggccaggttgtctggcagtggaaggtgacccaggctgtgtgccaggccctatgt
ggcaagaaggacttccctgtgctgggatcaggccgggagccatctgtacctcccgaatgt
cgctgcctggcctatactttccaccgtgagggcaggctctaccaggctacctatgatggc
gagtggagtcgagccaagccccacggcaagggaaccctgaagtggccagacgggcggaac
cacgttggggatttctaccagggcctggagcatggctttggcatctgcctggtgccccag
gcctctgaggacaagtttgactgttacaagtgtcactggcgggaaggcaggatgtgtgag
tacggcatctgtgagtatggcactgacgaggtgtacaagggctattttcaggccggtgtg
cggcatggatttggcgtcctcgacagcgccccgcaggccccccagcccttcaggtacacg
ggccactgggagagaggccagaggagcggctacggcatcgaggaggacagggacaggggt
gagcgctacattggcatgtggcaggctgaccagcgtcatggccccgggatcgtggtcacc
caggcaggcgtctgctatcagggcacattccaaggagacaagatggctggcccaggcatc
ctgctgtgtgaggatgattctctgtatgaaggtactttcacgagggagctgacgctctta
ggaaagggcaaggtcaccttccccaatggcttcaccttggagggttctttctgcagtggg
acagataaaggactgtacacacagggagtgctggacacaactgccctcccgcccaaccca
agcagtacacgcaagagacagctgggactgggtgccttccctgtggagagccgctggcag
ggagtctacagccccttccgggacttcctgcgtttaggctgtcctggggaactgcaggaa
gccctcctgggcttccacgtgcagagctccagggagctacgcaagtcccaggagtacctg
tgttgtgagaggagccaccccaaggactgtgtgggcagcatggaagatatcctgaaggag
ctgctgcagcaccgaaagcccaaggccctgcagcagtacctcaggaaggctctgagcaat
tcccgacaccccctggggaagttactccaaaccctgatgctgaccttccaggccacgtat
tcgggcataggggccaacaaacacctgcaggcaatggcccaggaggaggtgaagcaacac
gcccgggagctttgggctgcctacagaggtctgctgaaggtcgccttgctgcgccagggc
cagaccctggaagaggagagcatggagacaagggaccttcaggtgcacgggttgctgttg
cccctcctcctacccagcttctactcggagctcttcacattgtatctgcttctccacgag
agagaggacgggctgtacagccggggcatcgccaacctcagcctgttccccgacaccaag
ctcctggagttcctggatgtgcagaagcatctgtggcccctcaaggacctcaggctaaca
agcaatcagagatactctctagtccgggacaagtgtttcctgtcggccactgaatgtctg
cagaagatcatcaccacagtggaccctcgggagaagctggaggtgcttgagaagacctat
ggggaaattgaggccaccgtgtcacgggtgctaggccgggaatacaaactgcccatggat
gacctgttaccactgcttatctacgtggtgtcccgagctcgaattcagcatctgggagct
gagatccacctgatccgagacatgatggaccccatccacacaggtggcctccatgacttc
ctgcttacagctttagagtcctgttatgagcacatccagaaggaagacatgaggctgcac
cacctgcctggccactgggacgcaagagaactctggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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