KEGG   Rattus norvegicus (rat): 316211
Entry
316211            CDS       T01003                                 
Symbol
Usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
  KO
K11834  ubiquitin carboxyl-terminal hydrolase 44/49 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    316211 (Usp49)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    316211 (Usp49)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     316211 (Usp49)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   316211 (Usp49)
Ubiquitin system [BR:rno04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    316211 (Usp49)
SSDB
Motif
Pfam: UCH zf-UBP UCH_1 zf-UBP_var
Other DBs
NCBI-GeneID: 316211
NCBI-ProteinID: NP_001129942
RGD: 1310513
Ensembl: ENSRNOG00000013866
UniProt: D3ZJ49
Position
9:complement(20803177..20867681)
AA seq 685 aa
MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEE
TGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAVRGQKQDLPARRGRTLRST
AAGEDVVPPQRTPQGQPQMLTALWYRRQRLLAKTLRLWFEKSSRGRAQLEQRRQEEALER
KKEAARQRRREVKRRLLEELASAPPRKSARLLLHAPGPVAVRPATLATSRRMSAAALKPR
RQLAVAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLNLDPSTSEHLFPQATNGKAQI
PSRPASSTAAGFSVRSDRAQGFEPQGFCWSSGASISRSLELIQNKEPSSKHISLCHELHT
LFRVMWSGKWALVSPFAMLHSVWSLIPAFRGYDQQDAQEFLCELLHKVQQELESEGSTRR
ILIPFSQRKLTKQVLKVVNTIFHGQLLSQVTCVSCNYKSNTIEPFWDLSLEFPERYHCVE
KGFVPLNQTECLLTEMLAKFTETEALEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIY
RLPQVLRLHLKRFRWSGRNHREKIGVHVVFDQVLTMEPYCCGDMLSSLDKDTFAYDLSAV
VMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFYTRRTVQGSA
KLSEPHLRAQVHSSSKDDRRTYTFP
NT seq 2058 nt   +upstreamnt  +downstreamnt
atggatagatgcaaacatgtagggcggttacggctcgcccaggatcactccatcctgaac
ccccagaagtggtgctgtctggagtgcgccaccaccgagtctgcgtgggcttgcctcaag
tgctcccacgtggcttgcggccgctacattgaagaccatgcactaaaacactttgaagag
accggacacccgctggccatggaggtccgggatctctacgtgttctgctacctgtgcaag
gattacgtgctcaatgacaaccccgaaggggacctgaagttgctaagaagctccctcctg
gctgttcgaggccagaagcaggacctgcccgcgaggcgtgggcggacgctgcggtccaca
gctgcaggcgaggacgtggtcccgccgcagcgtactcctcagggacagccgcagatgctc
acggctctgtggtaccggcgccagcgcttgctggccaagacgctgcggctctggtttgag
aagagctcccgcggccgtgcgcagctggagcagcggcggcaggaggaggcgctggagcgt
aagaaggaggcggcgcggcagcgacggcgcgaggtcaagaggcggctgctggaggagctg
gccagcgcgccgccgcggaagagtgcgcgcctgctcctgcacgctcccgggcccgtggcc
gtgcgccctgctaccctcgctacctcccggcgcatgtccgctgctgccctcaagccgcgc
cgtcagctggcggtggccccgggtgttactgggctgcgcaacctgggtaacacctgctac
atgaactccatcctccaggtgctcagccacctccagaagttccgggaatgtttcctgaac
ctcgacccctccacctccgagcacctgtttccccaagcaaccaacgggaaggctcagatc
cctagcaggccagccagcagcactgccgcggggttctcagtaaggagtgaccgggcccag
gggttcgaacctcagggcttctgctggagcagcggagcctccatcagcaggagcctagag
ctcattcagaacaaggaacccagctcaaagcacatttctctctgccacgaactgcacacc
ctcttccgagtcatgtggtctgggaagtgggcgctggtatcaccctttgccatgcttcac
tccgtgtggagcctgattcccgccttccgaggctacgatcagcaggatgcgcaggaattt
ctctgcgaactgctgcacaaggtacagcaggagcttgagtctgagggctccacacgccgg
atcctcatccccttctcccagaggaagctcaccaagcaggtcttaaaggtggtgaacact
atatttcatgggcagctgctcagtcaggtcacatgtgtatcatgcaattataaatccaat
accattgagcccttttgggatctatccctggaatttcctgaacgataccactgcgtagag
aaggggtttgtccctttgaatcagacagagtgcctgctcactgaaatgctagccaagttc
accgagacagaggccctggaggggagaatctacgcttgtgaccagtgtaacagcaaacga
cgaaagtccaaccccaaaccccttgttctgagtgaagctaggaagcagttaatgatctac
agactacctcaggtcctccggctacaccttaaaagattcaggtggtctggccgtaaccat
cgtgagaagatcggggtccatgtcgtctttgatcaggtgttaaccatggaaccttactgc
tgcggggacatgctctcctcccttgacaaagacacctttgcctatgacctctccgcagtg
gtcatgcatcacgggaaagggtttggctcaggacactacacagcctattgctacaacaca
gagggaggtttttgggtccactgcaatgactcaaagctggatgtatgcagtgtggaggaa
gtgtgcaaaacccaggcctacattcttttttacactcgaagaacagttcagggcagcgca
aaactctcagaaccccatctccgagctcaggtgcactccagcagcaaggacgatcgcaga
acatacacatttccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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