KEGG   Rattus norvegicus (rat): 316216
Entry
316216            CDS       T01003                                 
Symbol
Taf8
Name
(RefSeq) transcription initiation factor TFIID subunit 8
  KO
K14649  transcription initiation factor TFIID subunit 8
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    316216 (Taf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    316216 (Taf8)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     316216 (Taf8)
SSDB
Motif
Pfam: Bromo_TP TAF8_C TFIID-31kDa Bromo_TP_like DUF3090 CENP-S
Other DBs
NCBI-GeneID: 316216
NCBI-ProteinID: NP_001101667
RGD: 1308423
Ensembl: ENSRNOG00000015249
UniProt: A0A8I6AWS9 A6JIJ8
Position
9:20989554..21009541
AA seq 308 aa
MADTATGPGGSGTRPGNKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT
EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVDTLPAYAKRSQRMVITAP
PVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQ
RRDVERALTRFMAKTGETQSLFKDDVSTFPLIAARPFTIPYLTALLPSELEIQQMEETDS
SEQDEQTDTENIALHISTDESGAEKENTSVLQQNSSLSGSRNGEESTIDNPYLRPVKKPK
IRRKKSLS
NT seq 927 nt   +upstreamnt  +downstreamnt
atggctgacacggccaccgggcctggtggctccggaacgagaccaggaaataaacagtcc
actaacccggctgataactaccatctggcccggaggaggaccctgcaagtggttgtgagc
tctttgctgacagaggcgggatttgagagcgcggagaaagcatctgtggagacgttgaca
gagatgctgcagagctacatctcagaaattgggagaagcgccaagtcatactgcgagcac
acagccaggacccagcccacgctgtcggacatcgtggtcacactggttgaaatggggttc
aatgttgacactctgcctgcttatgcaaaacgatctcagaggatggtcatcactgcacct
ccggtgaccaatcagccagtgacacccaaggccctcactgcagggcagaaccgacctcac
ccgccacacatccccagccattttcctgaatttccggatccacacacgtacataaaaact
ccgacgtaccgtgagccagtgtctgactaccaggtcctccgagagaaggccgcgtctcag
aggcgagacgtggagcgagcactcacccgcttcatggccaagacaggcgagacccagagt
ctcttcaaggatgacgtcagcactttccccttgattgcagccagacctttcaccatcccc
tacctcacggccttgctcccctccgagctggagatacagcagatggaagagacagactcc
tcggagcaggacgagcagacagataccgagaacatcgcgctccatatcagcacggacgaa
tccggagctgagaaggagaacacttctgtcctgcagcagaactcctccttgtccggcagc
cggaacggggaggagagcaccattgataacccctatctgcggcccgtgaagaagcccaag
atccggaggaagaagtccctctcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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