KEGG   Rattus norvegicus (rat): 316351
Entry
316351            CDS       T01003                                 
Symbol
Npas2
Name
(RefSeq) neuronal PAS domain-containing protein 2
  KO
K09026  neuronal PAS domain-containing protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    316351 (Npas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    316351 (Npas2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    316351 (Npas2)
SSDB
Motif
Pfam: PAS_11 PAS_3 PAS HLH PAS_9 PAS_4
Other DBs
NCBI-GeneID: 316351
NCBI-ProteinID: NP_001101684
RGD: 1309681
Ensembl: ENSRNOG00000013408
UniProt: F1MAG2
Position
9:48959225..49138036
AA seq 816 aa
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKLDKTTVLEKVIGFLQKHN
EVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHL
PSDVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSPSPEFLKSDNDLEFYCHLLRGSLNPK
EFPTYEYIKFVGNFRSYNNVPSPSCNGFDNTLSRPCRVPLGKEVCFIATVRLATPQFLKE
MCVADEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCH
QHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVER
RQELALEDPPTEAMHPSALKEKDSSLEPQPHFNALDMGASGLTSSPSPSASSRSSHKSSH
TAMSEPTSTPTKLMAENSTTALPRSATLPQELPVQGLSQAATMPAPLLSSSSCDLAKQLL
PQSLPQTVLQSPPAPVTQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCL
VQDSNVQMFLQQPAVSLSFSGAQRPAAQQPLQQRPSAPSQPPLVVNTPLPGQITSTQVTN
QHLLRESNVMSAQGPKPIRSSQLLPASSRSLSSLPSQFSSTASVLPPGLSLTTVAPTPQD
TSQCQPSPDFGHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQVTFPSPD
SHPTSSSAPTPVLLMGQAVLHPGFPASQPSPLQPTQVQQQPPPYLQAPTSLHSEQPDSLL
LSTFSQQPAPLGYAATQPTQPQPPRPSRRVSRLSES
NT seq 2451 nt   +upstreamnt  +downstreamnt
atggacgaagatgagaaggatagagcaaagagagcctctcgaaacaagtctgagaagaag
cgtcgggaccagttcaatgttctcatcaaagagctcagctccatgctcccaggcaacact
cggaaactggacaaaacaactgtgctggagaaggtcatcggatttctgcagaaacacaat
gaagtctcagcacaaacagaaatctgtgacatccagcaggactggaagccttcattcctc
agtaacgaagaattcacccagctgatgttggaggcgttagatggcttcgtcattgttgtg
acaacggacggcagcatcatctatgtgtccgacagcatcacgcctctcctcggacattta
ccgtcggatgtcatggatcagaacttgttaaatttccttccagaacaagaacattccgaa
gtttataaaatcctttcctcccatatgcttgtgacggattccccctccccagaattccta
aaatctgacaacgatttagagttttattgtcatcttctgagaggcagcttgaacccaaag
gaatttccaacttacgaatacataaaatttgtaggaaattttcgctcttacaacaatgtg
cctagcccctcctgtaatggctttgacaacaccctttcaagaccctgccgcgtgcccctg
gggaaggaggtctgcttcatcgccacggtgcgcctggcaacaccacagttcttaaaggaa
atgtgtgtagctgacgaacctttagaggaattcacttcgaggcatagcttggaatggaaa
tttttatttctggatcacagagcccctccaatcataggatacctgccctttgaagtactt
ggcacgtcaggctatgactactaccacattgatgacctggagctcctggccaggtgccac
cagcacttgatgcagtttggcaaagggaagtcgtgttgttaccggtttctaaccaaagga
cagcagtggatttggttgcaaacccactactacatcacctaccaccagtggaactccaag
cccgagttcatcgtgtgcacacactcggtggtcagttacgcagatgtccgagtggaaagg
agacaggagctggctctggaagatccacccacagaagccatgcacccctctgcactgaag
gaaaaggactcaagcctagagcctcagccgcactttaatgcacttgacatgggtgcctca
ggtcttaccagcagtccttcgccatcagcatcctcgaggagttcccacaagtcctcacac
acagccatgtcagaacccacctccactccaaccaagctgatggctgagaacagcaccaca
gctttgccaagatcagccaccctaccccaggagttaccagtgcaggggctcagccaggca
gccacaatgccagctcctctgctttcctcatcatcctgtgaccttgccaagcagctcctg
cctcagtccctgcctcagacggtcctgcagagtccacctgctccagtgacacagttttca
gcacaatttagcatgttccagaccataaaagaccagttggagcagaggacacggatcctg
caggccaacattcggtggcagcaggaagagcttcacaagatccaggaacaactctgcctg
gtccaggactccaacgtccagatgtttctacagcagccagcggtgtctctgagcttcagc
ggtgcccagagaccggcagctcagcagccactgcaacaaaggccatctgcaccgtctcag
cccccgcttgtggtcaacactccactgccggggcagatcacatccacccaagtcacaaac
cagcacctgctcagagaatcgaatgtgatgtccgcccagggtccaaaaccaataagaagc
tcccagttgctgcctgccagcagccgttcactgagcagcctgccgtcccagttcagcagc
acagcgtccgtgctcccaccaggcctgagcctcaccactgtcgctcccacccctcaggac
accagccagtgccagcccagccctgacttcggccatgatcggcagctcaggctgttgctg
agccaacccatccagcctatgatgcctgggtcttgtgatgccaggcagccctcagaagtc
agcaggactggacggcaagtcaaatatgcacagagccaagtgacgtttccaagtcctgac
tcccaccccaccagcagcagcgcccccaccccggtcctgttgatggggcaggccgtgctc
catcccggcttccccgcatcccagccatcacccctgcaaccaacacaggtacaacagcag
ccaccaccctatctacaggcaccaacatctctgcacagtgaacagccggactcgctcctt
ctctccaccttctcccagcagccagcacctctgggctatgcagccacacagcctacacag
ccgcaacccccacgcccttcccgcagggtcagccggctgtcagagtcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (39)   

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