KEGG   Rattus norvegicus (rat): 316440
Entry
316440            CDS       T01003                                 
Symbol
Ino80d
Name
(RefSeq) INO80 complex subunit D
  KO
K11668  INO80 complex subunit D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    316440 (Ino80d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    316440 (Ino80d)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    316440 (Ino80d)
SSDB
Motif
Pfam: zf-C3Hc3H zf-primase
Other DBs
NCBI-GeneID: 316440
NCBI-ProteinID: NP_001178738
RGD: 1304808
Ensembl: ENSRNOG00000024272
UniProt: D3ZTM2
Position
9:complement(71940941..72007879)
AA seq 1021 aa
MYEGKHIHFSEVDNKPLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQ
RCTNPIPKSEDRRYCNSHLQVLGFIPKKERKKKNDPVDEVKVRHQMDAMAFSLTVPTLAL
KMPNGLDSMSLSPPGARVPLHYLETELEDPFAFNEEDDDLKKGVTVRKKLQSKLAQNRQR
QRETEILKVRQEHFSTPPTPPQQHAHLSPLPTSLKPPAPPQGSVCKSPQPQSTSLPMQGV
APTTHSIAQTRQASHKRPLPLLPSSRAPVSDTPRTDRILMKATAFSPHFSCISRLQRLVK
LCTQKHQLDADLFPHLGLDWSEESGEELEDSDQASPYQVAWSVRETLRQERHTSDDDDAE
SRSSRVTQLCTYFQQKYKHLCRLERAESRQKKCRHTFRKALLQAASKEPECTGQLIQELR
RAACSRDSLSQTKLKEVEPAACSGTVKGEQCTNQALPFTRHCFQHILLNRSQQLFSSCTA
KFADGQQCSVPVFDITHQTPLCEEHAKKMDNFLRGDNSRKVQHQQQRKPRKKTKPPALTK
KHKKKRRRGPRRPQKPIPPAVPQGNLSMPTSVSLPVQASQIRSPSTPELSADELPDDIAN
EITDIPHDLELNQEDFADVLPRLPDDLQDFDFFEGKNGDLLPTTEEAEELERALQAVTSL
ECLSTIGVLSQSDGVPVQGLSDRGMGVFSTGTDASGIQSLSREVNTDLGELLNGRIVHDS
FSSLELDENLLHSATLSNPPTPLAGQIQGQFSAPASVGLTSATLLSQSALGERAFPGQFH
GLHDGSHASQRPHPAQLLSKADDLITSRQQYSSDHSHSSPHGSHYDSEHVPSPYSDHITS
PHTSYSGDNMAATFSAEMPIMAQHLLPTQLEVPLGGVVNPRTHWGNLPVNLGDPSAFSNL
LGADGHLLSTSLSTPPTTSNSETTQPAFATVTPSSSSVLPGLPQTSFSGMGPSAELMAST
SPKQQLPQFSAAFGHQLSSHSGIPKDLQPSHSSIAPPTGFTVTGATATSTNNASPPFPTP
N
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgtatgaagggaaacatatacacttctctgaggttgacaataagcccttgtgctcatat
agccccaaactgtgcaagcagcggcgactcaacggctacgctttctgtatcagacacgtt
ctggaagacaagactgcccccttcaagcaatgtgaatatgtggccaagtataacagccag
cgctgcaccaaccccattcccaagtcagaggatcgcaggtactgcaacagccacttgcag
gtactcggctttatcccgaaaaaagagaggaagaaaaagaatgacccggtagatgaggtg
aaggtcaggcaccagatggacgccatggcatttagcctgacggtacctaccctggccttg
aagatgcccaatggactggatagcatgtccctctctccacctggggcaagggttcctctc
cactacctggaaactgagttggaagacccctttgctttcaatgaggaagacgatgaccta
aagaaaggggtgacggtgagaaaaaagttgcagagcaaattggctcagaaccggcaacgc
cagagagagacagagattttaaaagttcggcaagagcactttagcacccctcccacacct
ccacagcagcacgcccacctgtcacctctacctacttctttaaaacctccagcgccacca
cagggctcagtctgcaagtcacctcagcctcagagcaccagcctaccaatgcagggagtg
gcccccaccacacactctatagcacaaacaaggcaggcctctcacaagaggcctctgccc
ctccttccctccagtcgagctcccgtctcagacacccccaggactgaccgaatcctcatg
aaagccaccgccttctctccacacttctcttgtataagccgactgcagagactggtgaaa
ctgtgtacccaaaagcatcagctggacgcggatctgtttcctcacttagggctggactgg
tctgaggagagcggagaggagctggaggattcagatcaggcttcaccatatcaggtcgca
tggtccgtccgagaaaccctcagacaggaaagacacacgtcagatgacgacgatgcggag
agcaggagctccagggtgacccaactttgcacttactttcagcagaaatacaagcacctc
tgccgcctggagcgtgcagagtcgcgacaaaagaaatgccggcatacgtttaggaaggcg
ctgctgcaggcagccagtaaggagcccgaatgtactggtcagctgatacaagaacttcgg
agagctgcgtgtagccgagacagcctcagccagaccaagttgaaggaggtggagccagca
gcttgcagtggaacagtgaagggtgaacagtgcacaaaccaggccctgcccttcaccagg
cattgtttccagcacatcctcttgaaccgttctcagcagctgttctccagctgcactgcc
aagtttgcagacggacagcagtgctctgtgccagtgtttgacattacacaccagacgccc
ctgtgcgaagaacatgccaaaaagatggataatttcctgagaggagataactcccgtaaa
gttcagcaccagcaacagaggaaacctaggaaaaaaacaaagccccctgcacttaccaaa
aaacacaagaagaagagacggcgtggacctcgtcgaccccagaagcccatccctcctgca
gtgccccaagggaatctcagcatgcccaccagcgtctcactgccagtgcaggcctcccag
atccgaagcccttccacgccagagctgagtgctgacgagttgccggatgacattgccaat
gagatcactgacattccgcacgacttggaattgaaccaggaagactttgcagatgtcctg
ccgcggctgccggatgatttacaagactttgatttttttgaaggaaagaatggagacctc
ctcccgaccactgaagaagctgaagagcttgagcgggccttgcaagctgtaacttctctc
gagtgcctgagtacaattggggtactttcccagtcagacggtgtgccagtccagggcttg
tcagatagagggatgggggtgttctccacgggtaccgatgcttcgggaatccagtccttg
agtcgagaagtaaacacggatctaggggagctactgaacggacgtatagtacacgatagc
ttttctagtctagagctggacgagaacctactccattctgctactctgtccaacccacct
acacccctggcagggcagatccaggggcagttctctgccccagccagcgttggccttact
tctgccactctgctcagccagagtgcacttggggagagagccttcccaggacagtttcat
ggacttcatgatggcagccatgcctctcagaggccacatcctgcccagctgctgagcaag
gcagacgaccttatcacctcacgacagcaatacagcagtgatcattcacactcctcaccc
catggaagccattatgatagcgagcacgtgccgtcgccctacagtgaccatatcacctct
ccccacacatcttactctggtgataatatggcagctaccttttcagcagagatgcccatc
atggcccagcacttgctccccacccagcttgaggtgccacttggaggagtggtcaacccc
agaactcactggggcaatctccccgtcaaccttggcgatccctctgcatttagcaacctc
cttggcgcggatggacaccttctttccacttccctctccacgccacccaccacatccaac
tcagagaccacacagcctgccttcgccaccgttaccccaagcagttccagtgtgcttccg
gggttaccacagaccagcttcagtggcatggggccttctgctgaactaatggcctccacc
tctcccaagcagcaactcccacagttcagcgcagccttcggccaccagctgagttctcac
agtggcattcctaaggacctgcagcccagccacagctccatagcccctcctacaggcttc
acagtaacaggtgccaccgctacaagtaccaataatgcatctccccccttccccaccccc
aactga

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