KEGG   Rattus norvegicus (rat): 316531
Entry
316531            CDS       T01003                                 
Symbol
Tuba4a
Name
(RefSeq) tubulin alpha-4A chain
  KO
K07374  tubulin alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
rno04210  Apoptosis
rno04530  Tight junction
rno04540  Gap junction
rno04814  Motor proteins
rno05010  Alzheimer disease
rno05012  Parkinson disease
rno05014  Amyotrophic lateral sclerosis
rno05016  Huntington disease
rno05020  Prion disease
rno05022  Pathways of neurodegeneration - multiple diseases
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    316531 (Tuba4a)
  09143 Cell growth and death
   04210 Apoptosis
    316531 (Tuba4a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    316531 (Tuba4a)
   04540 Gap junction
    316531 (Tuba4a)
  09142 Cell motility
   04814 Motor proteins
    316531 (Tuba4a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    316531 (Tuba4a)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    316531 (Tuba4a)
   05012 Parkinson disease
    316531 (Tuba4a)
   05014 Amyotrophic lateral sclerosis
    316531 (Tuba4a)
   05016 Huntington disease
    316531 (Tuba4a)
   05020 Prion disease
    316531 (Tuba4a)
   05022 Pathways of neurodegeneration - multiple diseases
    316531 (Tuba4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    316531 (Tuba4a)
   03036 Chromosome and associated proteins [BR:rno03036]
    316531 (Tuba4a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    316531 (Tuba4a)
   04147 Exosome [BR:rno04147]
    316531 (Tuba4a)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     316531 (Tuba4a)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     316531 (Tuba4a)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    316531 (Tuba4a)
Exosome [BR:rno04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   316531 (Tuba4a)
  Exosomal proteins of other body fluids (saliva and urine)
   316531 (Tuba4a)
  Exosomal proteins of colorectal cancer cells
   316531 (Tuba4a)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 316531
NCBI-ProteinID: NP_001007005
RGD: 1359623
Ensembl: ENSRNOG00000003597
UniProt: Q5XIF6 A6JVZ9
Position
9:complement(84158871..84174041)
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatttcagtccatgtgggccaggcaggtgtccagatgggcaatgcctgc
tgggagctctactgcctggaacatgggattcagcctgatgggcagatgcctagcgataag
accattggtggaggggatgactccttcaccaccttcttctgtgaaactggagctggaaaa
catgtgcctcgggcagtctttgtggatctggagcctactgtaattgatgagatccgaaat
ggcccgtaccgccagctcttccacccagaacagcttatcactgggaaggaagatgcagcc
aacaactatgcccgtggtcactacaccattggcaaggagatcatcgacccagtgctggac
cggatccgcaagctgtctgatcagtgtacaggactccagggctttctggtgttccacagc
tttggaggaggcactggctctggcttcacctctctgctgatggaacggctttctgttgac
tatggcaagaagtccaagctggagttctccatctacccagccccacaagtgtccacggct
gtagtggagccctataactccatcctgaccacccataccaccctggaacactcggactgt
gccttcatggtggacaacgaggccatttatgacatctgtcgccgtaacctggatattgag
cgcccaacctataccaacctcaaccgcctcatcagccaaattgtctcctccatcacagct
tccttgcgctttgatggggccctcaatgtggacctgacagagttccagaccaacctggta
ccctaccctcgcatccacttccccttggctacctacgcaccagtcatttctgcagagaag
gcctaccatgagcagctgtcagtggcagagatcaccaatgcctgttttgagcctgccaac
cagatggtgaaatgtgaccctcggcatggcaagtacatggcctgctgcctgctgtaccgg
ggagatgtggtgcccaaggatgtgaacgctgccatcgctgccatcaagacgaagcgcagc
atccagtttgtggactggtgccccacaggcttcaaggtcggtatcaactaccagcctccc
accgtggtgcctgggggcgacctggccaaggtgcagcgtgcagtgtgcatgctgagcaac
acaaccgccattgctgaagcctgggcccgcctggaccacaagtttgacttgatgtatgcc
aagagggcttttgtacactggtatgtgggtgagggaatggaggagggggagttctccgag
gctcgagaggatatggctgccctggagaaagattatgaggaagtaggcatcgactcctat
gaggacgaggatgagggagaagaatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (71)   
   RefSeq(nuc) (5)   
   GenBank (33)   
   EMBL (33)   
Protein domain (3)   
   Pfam (3)   
All databases (106)   

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