KEGG   Rattus norvegicus (rat): 316533
Entry
316533            CDS       T01003                                 
Symbol
Chpf
Name
(RefSeq) chondroitin sulfate synthase 2
  KO
K00747  chondroitin polymerizing factor [EC:2.4.1.175 2.4.1.226]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rno01100  Metabolic pathways
Module
rno_M00058  Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
    316533 (Chpf)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rno01003]
    316533 (Chpf)
Enzymes [BR:rno01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.175  glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
     316533 (Chpf)
    2.4.1.226  N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
     316533 (Chpf)
Glycosyltransferases [BR:rno01003]
 Glycan extension
  O-Glycan
   316533 (Chpf)
SSDB
Motif
Pfam: CHGN Fringe
Other DBs
NCBI-GeneID: 316533
NCBI-ProteinID: NP_001005906
RGD: 1359458
Ensembl: ENSRNOG00000020038
UniProt: F7F860 Q5XIQ8
Position
9:complement(84411824..84416523)
AA seq 770 aa
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAAR
RPNSVQPGAERERPGADESWEPRVLPYHPAQPGQATKKAVRTRYISTELGIRQKLLVAVL
TSQATLPTLGVAVNRTLGHRLEHVVFLTGARGRRTPSGMAVVALGEERPIGHLHLALRHL
LEQHGDDFDWFFLVPDATYTEAHGLDRLTGHLSLASATHLYLGRPQDFIGGETTPGRYCH
GGFGVLLSRTLLQQLRPHLESCRNDIVSARPDEWLGRCILDATGIGCTGHHEGMHYNYLE
LSPGEPVQEGDPRFRSALTAHPVHDPVHMYQLHKAFARAELDRTYQEIQELQWEIQNTSR
LAADGERASTWPVGIPAPSRPASRFEVLRWDYFTEQHTFSCADGSPRCLLRGADQADVAD
VLGTALEELNRRYQPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRWPLTHR
VQLLRPLSRVEILPVPYVTEASRVTVLLPLAAAECDLASGFLEAFATAALEPGDAAALTL
LLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTSAPSPLRLMDLLSKKH
PLDTLFLLAGPDTVLTPDFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPGPPELGRD
TGHFDRQAASEACFYNSDYVAARGRLVAVSEQEEELLESLDVYELFLRFSSLHVLRAVEP
ALLQRYRAQPCSARLSEDLYHRCRQSVLEGLGSRTQLAMLLFEQEQGNST
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgcgggcgtcgctgctgctgtccgtgctgcggcctgcggggccggtggccgtgggcatc
tctctgggcttcaccctgagcttactcagcgtcacctgggtggaggagccttgcggaccc
ggaccaccccaacccggcgactctgaactaccgccgcgcggcaacaccaacgcggcgcgc
cggcccaactcggtgcagcccggagcggagcgcgagaggcccggggccgacgaaagctgg
gagcctcgtgtcttgccctaccatcccgcccagccaggccaggctaccaagaaggccgtc
agaactcggtatatcagcacggaactgggcatcaggcagaagctgctagtggcagtgctg
acctcacaggccacgttgcctacactgggtgtggctgtaaaccgaactctgggacaccga
ttggagcatgtagtgttcctgaccggtgcgaggggccgccggacaccatcaggcatggcg
gtggtggcactgggcgaagagcggcccatcggacacctgcacctggcgctgcgccacctg
ctggagcaacacggcgatgactttgactggtttttcctagtgcctgatgccacctacact
gaggcgcatggactggaccgcctaactggccacctcagccttgcttcagcaacccacctc
tatcttggccgaccccaggacttcatcggtggagagactaccccaggccgttactgccac
gggggctttggagtgttgctgtctcgcacactactacagcaactgcgcccccacctggaa
agctgccgtaatgacatcgtcagtgctcgcccagatgagtggttgggccggtgcatcctt
gatgccacaggcattggctgtactggtcaccatgagggaatgcactacaactatctggaa
ctgagccctggggaacctgtgcaggagggggaccctcgtttccgcagcgccttgacagcc
caccctgtgcatgaccctgtgcacatgtaccagctgcacaaagcttttgcccgggctgag
ctggaccgcacataccaggagattcaagaactgcagtgggagatccagaataccagcaga
ctggctgctgatggggagagggcttctacctggccagtgggcattccagcgccgtctcgc
cctgcctcgcgctttgaggttctgcgctgggactacttcacggaacagcacactttctcc
tgtgctgacggctcaccccgctgcctgctgcgtggggccgaccaggccgatgtggctgat
gtcctaggaacagccttagaggagctcaaccgccgttaccagccagcactgcggctccag
aagcaacagctggtgaatggctaccggcgttttgatccagcccgaggtatggagtacaca
ctagacttgcagctggaagcgctgacgccccagggtggccgctggcccctcacccacagg
gtacagctccttcggcccttgagccgagtggagatcttgcctgtgccctatgtcaccgag
gcttctcgggtcactgtgctgctgcctctggctgcagcagagtgtgacctggcatctggc
ttcctagaagcctttgccactgcagcactggaacctggcgatgccgcagccttgaccctg
ctgctgctgtatgagccacgccaggcccagcgggcagcccacgcagatgtcttcgcaccc
gtcaaagcccacgtggccgagctagagcggcgtttccctggtgcccgagtgccctggctc
agtgtacagacatccgcgccctctccgctgcgcctcatggatctactctccaagaagcac
ccgctggacactctgttcctgctggccgggccagacacagtgctcacacccgacttcctg
aaccgctgccgcatgcacgccatctcgggctggcaagccttctttcccatgcacttccag
gccttccaccctgctgtggctccacctcagggccctgggccaccagaactgggccgtgac
accggccactttgatcgtcaggctgccagcgaggcatgcttctacaactccgactatgtg
gcggcccgtggacggctggtggcagtctccgagcaggaggaggagctgctggagagcctg
gatgtgtatgagttgtttctacgcttctctagcttgcatgtgctgagggcagtggaacca
gccttgctgcagcgctaccgggcccagccatgcagcgctcggctcagcgaggacctttat
caccgctgtcgccagagcgtgcttgagggccttggctcccgcacccagcttgccatgctg
ctctttgaacaggaacagggtaacagcacctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (8)   
   KEGG ENZYME (2)   
   KEGG REACTION (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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