KEGG   Rattus norvegicus (rat): 316638
Entry
316638            CDS       T01003                                 
Symbol
Sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 precursor
  KO
K24470  insulin-responsive sequence DNA-binding protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    316638 (Sned1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 EGF-like domain-containing proteins
  hEGF / cEGF domain-containing proteins
   316638 (Sned1)
SSDB
Motif
Pfam: EGF hEGF NIDO fn3 EGF_2 EGF_CA cEGF
Other DBs
NCBI-GeneID: 316638
NCBI-ProteinID: NP_001400770
RGD: 1566079
Ensembl: ENSRNOG00000023548
Position
9:101221497..101281401
AA seq 1403 aa
MRRGAAWALLLAAALGLGARGVRAAVALADFYPFGTKRGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDAAMLNRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGR
FSFTIFNYESILWTTGTHASSGGDADGLGGIAAQAGFNAGDGHRYFNIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNPSYTCSCL
AGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPAGFQGPTCESAQSPCDNKVCQN
GGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCLNGGSCVDLVGNYSCICVEPFEGP
QCETGSYVVPSPCLSNPCLNGGTCVDADQGYVCECPEGFMGLDCRERILNDCDCRNGGRC
LGANTTICQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISHS
LPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCKETGD
EYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGICEDLGTDFSCHCQPGYTGHRCQAEVDCGQPEEVKHATMRLNGTRMGSVA
LYTCDPGFSLSVLSHMRVCQPQGVWSQPPQCIEVDECQSQPCLHKGSCQDLIAGYQCLCS
PGYEGVHCELETDECQAQPCRNGGSCRDLPGAFICQCPEGFVGTHCETEVDACASSPCQH
GGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGK
DCTKELLPPTALRVERVEESGVSISWSPPEGTTARQVLDGYAVTYASSDGSSRRTDFVDR
SRSSHQLRALAAGRAYNISVFSVKRNTNNKNDISRPAALLTRTRPRPIEDFEVTNISANA
ISVQWALHRIQHATVSRVRVSVLYPEDTVVQSTEVDRSVDRLTFGDLLPGRRYSVRLTTL
SGPGGAEYPTESLASAPLNVWTRPLPPANLTASRVTATSAHMVWDPPTPGISLEAYVINV
TTSQNTKSRYIPNGKLVSYTVRDLMPGRRYQLSVTAVQSTEQGQLHSEPAHLYIITSPRD
GTDRRWHQGGHHSRMLRNRPAPLRLPELRLLNDHGAPETPTQPPRFSELVDGRARVSARF
GGLPSRAVTVRSQPTTPVPLKNTEAPEQARLALQLPKNNSKDTESTPGSCSEDTCQNGGT
CVPGANAHSCDCRPGFKGRHCELACEKVPRPCTRLFSETKSFPVWEGDVCHHVYKKVYKV
HQDVCFKERCQSTSLKKLKQESN
NT seq 4212 nt   +upstreamnt  +downstreamnt
atgcgccgtggcgccgcctgggcgctgctgctggccgcagccctggggctcggggcgcgc
ggggtgcgcgctgcggtggccctcgccgacttctacccgttcggcacgaagcgtggcgac
gccgtcaccccgaagcaggacgacggcggctcagggctgcagcccctctcggtgcccttc
ccgttcttcggcgccgagcactcaggactctacgtgaacaacaacgggatcatctccttc
ctgaaggaagtttctcagttcacccctgtggccttccccatcgccaaagaccgctgtgtg
gtagcggccttctgggcagacgtggataaccgacgcgcaggcgacgtctactaccgggag
gccaccgacgcagccatgctgaacagagccacggaggacatcaggcggtactttcctgag
ctcccggacttctctgctacctgggtttttgttgccacctggtaccgtgtgaccttcttc
ggaggcagcagctcttcccccgtcaacacattccaaacggtgctcatcactgacggccgg
ttctccttcaccatcttcaactatgagtccatcctgtggactacgggcacacacgccagc
agtggtggtgatgctgatggcttgggaggcattgcagcccaggcaggtttcaacgcaggt
gatgggcaccgctacttcaacatccctgggtcgcgcacagcagacatggctgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgtttagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctctgtgtgcctagtcctgcgtccgtgcctcaat
ggtggcaagtgcatcgatgactgtgtcacgggcaatccctcctacacctgttcctgtctc
gctggcttcacggggcgtagatgccacctggatgtgaacgagtgtgcttcccacccatgt
cagaacggtgggacctgcacccacggtgtcaacagcttcagttgccagtgcccagccggc
ttccagggacccacctgtgaatcagcccagtctccgtgtgacaacaaagtgtgtcaaaat
ggtggccagtgccaggcagagagcagctctgcagtatgtgtgtgtcaagctggatacact
ggggccacctgtgagaccgatgtggatgaatgcagctctgacccatgcctaaatggtgga
tcgtgtgttgacctggttggaaactacagctgtatttgtgtggagccctttgaaggacct
cagtgcgagacaggaagctacgtggtgccttcgccctgcctctccaacccctgcctgaac
gggggcacctgtgtggatgctgaccagggatacgtgtgcgaatgccctgaaggtttcatg
ggcttggactgcagagagagaattctcaatgactgcgattgccggaatggaggcagatgc
ctgggtgccaacaccaccatctgccagtgtcctccaggcttctttgggctcctctgtgaa
tttgaagtcacagccacgccctgcaacatgaacactcagtgtccagatggaggctactgc
atggagtatggcggaagctacctatgtgtctgccacacggaccacaacatcagccattct
ctgccctcgccctgcgactcagacccatgctttaatggaggttcctgtgacgcccacgag
gactcctacacgtgcgagtgccctcgtggattccatggcaggcactgcgagaaagcccgg
ccacacctgtgcagctcagggccctgccggaatgggggcacatgcaaggagactggtgac
gagtaccgctgcacctgcccttaccggttcactgggagacactgtgagattggaaagcca
gactcctgtgcctctggcccctgtcacaacggtggcacttgtttccactacattggcaaa
tacaagtgtgactgccctccaggcttctctggtcggcactgtgagatagccccctccccc
tgcttccggagcccatgtatgaatgggggtatctgcgaggatctaggaacagatttctcc
tgccactgccaaccaggatatacaggacaccggtgtcaggcagaggtggactgcggtcag
cctgaggaggtaaaacatgctaccatgcgtctcaatggaactcgcatgggctcggtggcc
ctgtacacatgtgaccccggcttcagcctgagcgtcctcagccatatgcgtgtctgtcag
ccacaaggtgtctggagccagcctccccagtgcattgaagtagatgagtgccagtctcag
ccatgcctgcataaaggctcctgccaggacctcattgctggttaccagtgcctctgcagc
ccggggtacgaaggagtccactgtgagctagagacagacgagtgccaagcacagccctgc
agaaatggaggctcctgcagggacctccccggggctttcatctgccagtgccctgaaggt
tttgttggaacccactgtgaaacagaggtggatgcctgtgcctccagcccctgccagcac
ggaggccggtgtgaggacggtggtggggcctacctgtgcgtgtgtccagagggcttcttc
ggctacaactgtgagacagtgagtgacccctgcttctctagcccctgtgggggccgcggc
tactgcttggccagcaacgggtcccacagctgtacctgcaaagtgggctacacaggcaag
gactgcaccaaagagctcctcccaccaacagccctcagggtagaaagggtggaggagagt
ggggtctccatctcctggagcccacccgagggcaccacggccagacaggtgctggacggc
tatgcagtcacctatgcctcctcggatggatcgtccaggcgcacggactttgtggaccgg
agccgctcctctcaccagcttcgggccctggcagccggccgtgcctacaacatctctgtt
ttctcagtcaagagaaacactaacaacaaaaatgacatcagcaggcctgcagccctgctc
acccgcacccgaccccgccctattgaagacttcgaggtcaccaacatttcagccaatgcc
atctcagtgcagtgggctcttcataggatccagcatgccactgtcagcagggttcgagtg
tctgtcctctaccctgaggacactgtggtccagtccacggaggtggacaggagtgtggac
cgcctcacatttggggacctgctgccagggagaagatacagtgtgcggctaaccaccctc
agtgggcctggaggagctgaatatcctacagagagcctggcctcagctccgctgaacgtg
tggacccggcctttgcctccagcaaacctgactgcctctcgagtcacagcgacctctgcc
catatggtctgggacccgcccactccaggcatctcactggaggcttacgtcatcaatgtg
accaccagtcagaataccaagagccgctacatccccaatgggaagctggtgtcctatacg
gtgcgtgatctgatgccaggtcggcggtaccagctctcggtcacagcggtgcagagcaca
gagcagggccagctgcacagtgagcctgcgcacctctacatcatcacctcccccagggat
ggcaccgacaggcgctggcaccagggaggacaccactcacgaatgctcagaaataggccg
gcccctttgcgcctgccagaactgcgcctcctcaatgaccacggtgcccctgaaacacca
acccagccacccaggttctcagagcttgtagacggaagagcaagagtgagtgccaggttt
ggtggattgcccagcagagcagtaactgtgagatcacaacccactactccggtgccgctc
aagaacacagaggcccctgagcaggcccgtctggcccttcagctacccaagaacaacagc
aaggacacagaaagtacccctggcagctgttcagaagacacctgtcagaatggaggcacc
tgtgtcccaggtgccaatgcccacagctgtgactgcaggcctgggttcaaaggcagacac
tgtgagcttgcctgtgaaaaagtgccccgcccctgcacacggctgttctctgagaccaag
tcatttcctgtctgggaaggagatgtctgccaccatgtgtataagaaagtctacaaagtt
caccaggacgtgtgttttaaggagcgctgccagagcacaagcctcaaaaagctcaaacag
gaatcaaattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (22)   
   RefSeq(nuc) (10)   
   GenBank (6)   
   EMBL (6)   
Protein domain (7)   
   Pfam (7)   
All databases (47)   

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