KEGG   Rattus norvegicus (rat): 316687
Entry
316687            CDS       T01003                                 
Symbol
Gin1
Name
(RefSeq) gypsy retrotransposon integrase-like protein 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: Integrase_H2C2 rve zf-H2C2
Other DBs
NCBI-GeneID: 316687
NCBI-ProteinID: NP_001020183
RGD: 1307449
Ensembl: ENSRNOG00000011962
Vega: OTTRNOG00000001024
UniProt: Q66H30
Position
9:complement(105740914..105762357)
AA seq 518 aa
MVRSGKNGDLHLKQIAYYKRTGEYHPTTLSSERSGIRRAAKKFVFKEKKLFYVGKDRKQN
RLVVVSEEEKKKVLRECHENGPGVHHGISRTLTLVESSYYWTSVTNDVKQWVYACQHCQV
AKSTVIVAPQQHLSVVGNPWSVVTVDLMGPFHTSSRSHVYAMIMTDLFTKWVMILPLCDV
SASEISKAIINIFFLYGPPQKIIMDQRDEFIDQINVELYRLFGAKEIVISQASGSVNPSE
STPSTVKTFLSKHCAEHPETWDEELPALSFAFNVTRVEPTKNSPYFQMFNRNPCLLECPH
EGGGEGTSVFARIVAAVREADGVVENQTPAAGQMESSTSEELSKSKVAKKKPKQLNPFHL
KVGHEVLRQRKNWWKDGRFQSEWVGPCVIDYITDSGCAVLRDNTGTRLKRPIKMSHLRPY
VREPSEQDSLYLLQGSIVADHDYIGLPEIPVGTYQANILVEDATIGIVDNELLISSKDHE
LLEYRNSKISALVEDHSSLEKQTFSLLDSSNQVLEYLS
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggtccgtagtgggaaaaacggtgaccttcatcttaaacagatcgcgtactataagcgc
acaggcgagtaccacccgaccacactgtcgagtgagagaagcggcatcagaagggcggct
aagaaatttgtcttcaaagaaaaaaagctgttttatgttggaaaagacagaaaacaaaat
cgtttggtagttgtttcggaagaggaaaaaaagaaagtgttgagagagtgccatgaaaat
ggccctggtgtccatcacggcatctccagaaccctcactctagtggagtccagctactat
tggacatccgtgaccaatgatgtcaagcagtgggtatatgcttgtcagcattgccaagta
gcgaaaagcacagttatcgtagcaccacagcagcacctttccgtggtgggaaacccgtgg
agtgtagttactgttgatctgatgggacctttccatacaagcagcagaagtcatgtgtat
gctatgatcatgacagacttgttcacaaaatgggttatgattttgcctttatgtgatgtt
tcagcatcagaaatttctaaagctattatcaatatatttttcctatatggacctcctcag
aaaataataatggaccaaagagatgaattcattgatcagatcaatgtagaactgtataga
ttatttggtgcaaaggagattgtaatttctcaagcgtctggaagtgtgaatccatctgaa
agcacgcccagcacggtgaaaacattcctctccaaacactgcgccgagcaccccgagacc
tgggacgaggagctgccagctctctcctttgccttcaacgtgacccgcgtggagcctact
aaaaactcgccgtatttccaaatgttcaaccggaacccttgcttgctcgagtgtcctcat
gaagggggaggcgaaggcacaagcgtgttcgccagaatcgtggctgcggttagagaggct
gatggcgtggtggagaaccagacaccagcagcaggccagatggagagcagcacttcagag
gagctgagtaaaagcaaagttgctaagaagaaaccaaagcagctaaaccccttccacttg
aaagtgggtcacgaggtgttaaggcagaggaagaactggtggaaggatggccgcttccaa
tctgagtgggttggtccttgtgtcatcgactacattacagacagcggatgcgctgtcctc
agagacaacactggaaccagactcaaacgacctatcaaaatgtcccacctcaggccttac
gtgagagagccaagtgagcaggacagtctttatctcctgcaaggttccatagtggcggat
cacgactacattggattacctgaaatcccagttggaacataccaggctaatattctggtg
gaagatgcaacgatcgggattgttgataatgaattattgatatcaagcaaggatcatgaa
ctcttagaatatagaaattcaaaaatctctgcgttggtagaagaccacagttctcttgag
aaacagactttcagtctactggattcttcaaatcaagttcttgagtacctcagttag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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