KEGG   Rattus norvegicus (rat): 316711
Entry
316711            CDS       T01003                                 
Symbol
Gtf2a1l
Name
(RefSeq) TFIIA-alpha and beta-like factor
  KO
K03122  transcription initiation factor TFIIA large subunit
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    316711 (Gtf2a1l)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    316711 (Gtf2a1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    316711 (Gtf2a1l)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIA
     316711 (Gtf2a1l)
SSDB
Motif
Pfam: TFIIA
Other DBs
NCBI-GeneID: 316711
NCBI-ProteinID: NP_001012136
RGD: 1308625
Ensembl: ENSRNOG00000016703
UniProt: Q641W8
Position
6:complement(11506362..11591622)
AA seq 468 aa
MAFVNLVPKLYRSVIEDVIEGVRDLFAEEGIEEQVLKDLKKLWETKVLQSKATEDFFRNS
VQAPLFTLQLPHGLPPALQSTASLLIPAGRTLQSFTPEDLNASCAANFAFPGYPIHVPAG
MALQTASGHLYKVNVPVVVTQTSGRAEILQHPFQQVLQQLGQPSIIQTTVPTLHPCSLQA
ETEKSHRMETALQQPTVLHSTPVDRKHTENATSERRVLPGNELRPQESTQYISLPGVGFP
PQVALTESSLEPVLGASANLTQNLHGGPFTQGPPGTLRHHVLDTQLHSLRDRIYGCDSVK
QLRKIEEPSSLRVSEKSCTSERDLNIQVTDDDINEIIQIDGTGDNSSAEEGGSIRDADEN
EFPGIIEAGDLKVLEEEVDSVSNEDSTANSSDNEDHQIDALEEDPLNSGDDVSEQDAPDL
FDTDNVIVCQYDKIHRSKNRWKFYLKDGVMCFGGRDYVFAKAIGEAEW
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggccttcgtcaacctggtgcccaaactctaccgatctgtaattgaagacgtaatcgag
ggtgtgcgggacctctttgctgaggaaggcatcgaggagcaggtgttgaaagacctgaag
aagctctgggaaaccaaagttttacaatctaaagcgacagaggacttcttcagaaatagt
gtgcaggcgccccttttcaccctccagctgccacatggcttaccgccagcactgcaatca
acagcatcgttgctgatcccggctggtagaaccctccagagttttacgccagaagacctg
aatgccagctgtgcagcaaacttcgcctttcctggctatccgattcacgtcccagcaggc
atggccctccagacggcgtccggtcacctttacaaagtcaatgtaccagtcgtggtgaca
cagacttcagggagagcagagattctccagcatccgtttcagcaagtccttcagcagctt
gggcagccttcaataatacagaccacggttccaacattgcacccatgctctcttcaagcc
gaaactgagaaatcacacagaatggagactgcgctgcaacagcctaccgttctgcattcc
actccagtggacaggaaacacacagaaaatgctaccagcgagaggcgtgttctccctggg
aatgagcttcggccgcaggaaagcactcagtacatcagccttccaggtgtggggtttcct
cctcaggtcgctctaacagagtctagcctggagccagtgctcggtgcctcagcaaacctg
actcagaatctacatggtggtcctttcacacagggccctccgggcactctccgccaccac
gtgcttgacacacagcttcatagccttagagacaggatatatggatgtgattctgtaaag
caactgaggaaaatagaggagcccagcagcctccgtgtgtcagagaagagttgtacttct
gagagggatctgaatattcaggtaaccgatgatgatattaatgaaataattcaaatagat
ggaaccggcgataactcttctgctgaagaggggggaagcataagggatgcagatgagaat
gaatttccagggatcattgaagccggcgaccttaaggtacttgaggaagaagtggacagc
gtatcaaatgaagattcaactgcaaacagcagtgacaacgaggaccatcaaatagacgcc
ctagaagaggatcccctaaattctggagatgatgtcagtgagcaggacgcgccagacctg
tttgacacagataatgtaattgtctgtcagtatgataagattcaccggagtaagaacaga
tggaaattctacttgaaagatggagtcatgtgctttggagggagagactatgtgtttgca
aaggccattggtgaagccgagtggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (12)   
   RefSeq(nuc) (10)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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