KEGG   Rattus norvegicus (rat): 317183
Entry
317183            CDS       T01003                                 
Symbol
Pcdh19
Name
(RefSeq) protocadherin-19 precursor
  KO
K16499  protocadherin delta 2
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    317183 (Pcdh19)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   317183 (Pcdh19)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 317183
NCBI-ProteinID: NP_001162600
RGD: 1565392
Ensembl: ENSRNOG00000003929
UniProt: D3ZG18 A6IVD4
Position
X:complement(101061002..101166777)
AA seq 1098 aa
MESLLLPVLLLLAVLWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFAMDTRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPHMGTVGLTIKVTDSNDNNPVFGE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTV
TGALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPIINLLSVNSELVEVSE
SAPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDSGVPMLQSAKSFTVRITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGM
PSLQSNATVRVIILDVNDNTPVITAPPLINGTAEVYIPRNSGIGYLVTVVKADDYDEGEN
GRVTYDMTEGDRGFFEIDQVNGEVRTTRTFNENSKASYELIVVAHDHGKTSLSASALVLI
YLSPALDAQESMGSVNLSLIFIIALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCRIAEY
SYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRR
SESTFLNVENQNTRNTTANHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYVNSRA
HLIKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTSVTSMGSHMP
DHDQNDGFHCREECRILGHSDRCWMPRNPMPTRSKSPEHMRNIIALSIEATAADVEAYDD
CGPTKRTFATFGKDVSSHPAEERSILKGKRTVDVTICSPKVNSAIREAGNGCEAISPVTS
PLHLKSPLPTKPSMSYTVALAPPAHDLDHHANTGASRPSEAEPRGADSEKVMHEVNPILK
EGRDKESPAVKRLKDIIL
NT seq 3297 nt   +upstreamnt  +downstreamnt
atggagtctctcctgctgccggtgctattgctgctggctgtactatggacgcaggcggcc
gccctgattaaccttaaatactcagtagaagaggagcagcgcgccgggactgtgatcgct
aatgtggccaaggacgcgcgggaggcaggcttcgcgatggatacccgacaggcttctgct
ttccgcgtggtgtccaactcggctccgcacctggtggacatcaaccccagttcgggcctc
ttggtcaccaagcagaagattgaccgagacctgctgtgccgccagagccccaagtgtatc
atctcgctagaggtcatgtccagctcaatggaaatctgtgtgattaaggtggaaatcaag
gacctgaacgacaatgctcccagttttccggccgcacagattgaactggagatctctgag
gcagccagccccggcacgcgtatcccactggacagcgcatatgacccggactcaggcagt
ttcggtgtgcagacctacgagctcacgcccaacgagctgtttggcctggaaataaagacg
cggggtgacggttcgcgctttgctgaactcgtggtggagaagagcctggaccgcgagaca
cagtcacactacagctttcgcattacggcgctcgacggaggcgacccaccacacatgggc
acagttggcctcaccatcaaggtgaccgactcgaatgacaacaacccggtgtttggtgag
tccacttactccgtgagcgtgcctgaaaactcacctcccaatacacctgtcatccgcctc
aatgccagcgatccagatgagggcaccaacggccaagtagtctactctttctatggttat
gtcaatgaccgcacgcgtgaactcttccaaattgacccacacagcggcctggtcactgtc
accggtgcgctagactatgaagagggccacgtgtacgaactggatgtgcaagccaaagac
ctggggcccaactctatccctgcacactgcaaagtcactgtcagcgtgctagacactaac
gataacccgccaattatcaaccttctgtcggtcaatagcgagcttgtggaggtgagcgag
agcgcccccccgggctatgtgattgctctggttcgggtgtctgatcgcgactccggtcta
aatggacgtgtgcagtgccgcttgctgggcaatgtcccctttaggctgcaggagtatgag
agcttctccactattcttgttgatggacggctggatcgagagcagcatgaccaatacaat
cttactattcaggctcgagacagcggtgtgcctatgctgcaaagtgccaagtcttttact
gtgcgtatcacagacgagaatgataaccacccacacttctctaagccttactatcaagtc
attgtacaggagaacaacactcctggcgcctatctgctctctgtgtctgcccgtgaccct
gacttgggtctcaatggcagcgtctcctaccaaattgtgccatcacaggtgcgagacatg
ccagtcttcacctatgtctctatcaatcccaactctggtgacatctatgcgctaagatcc
tttaaccatgagcagaccaaggcatttgaattcaaagtcctggccaaggatggtggcatg
ccctccctgcaaagcaatgccactgtgagggtcattatcctcgacgtcaacgacaatacc
ccggttatcactgccccacctctgatcaatggcactgctgaagtctacattcctcgaaat
tctggcataggctatttggtgactgtagttaaggcagatgattatgatgagggcgaaaat
ggccgagtcacctatgacatgacagaaggtgaccgaggtttcttcgaaatagaccaggtc
aatggagaagtcagaaccactcgtacctttaatgagaactccaaggcttcctatgagctt
atagtggtggcccatgaccatggcaagacatctctttctgcttctgcccttgtcctaatc
tacctgtccccagctcttgatgctcaagagtcaatgggctctgtgaacttatccctgatt
ttcattattgctctgggctccattgccggcattctctttgtcactatgatcttcgtggca
atcaagtgcaagcgtgacaacaaagagatccggacctacaattgcagaatcgctgagtac
tcctatgggcatcaaaagaaatcaagtaagaagaaaaaaattagtaagaatgacatccgc
cttgtacctcgggacgtggaggagacagacaagatgaatgttgtcagttgctcctccctt
acttcgtccctcaactatttcgactaccaccagcagacactgcccctgggctgccgtcgc
tctgagagcactttcctgaatgtggagaaccagaatacccgcaacaccactgccaaccac
atctaccatcactccttcaacagccagggcccacagcagccagacctgatcatcaatggt
gtgcccctgcctgagactgaaaactattcctttgactctaactacgtgaatagccgtgcc
catttaatcaaaagcagctccaccttcaaggacctagagggcaacagcctgaaggatagt
gggcatgaggagagtgaccagaccgacagtgaacatgatgtccagaggagcctgtactgc
gatactgccgtgaatgatgttctcaataccagcgtgacctccatgggatctcacatgcct
gaccatgaccagaatgacggatttcattgcagggaagagtgccggattcttggccactct
gatagatgctggatgccccggaatcccatgcccactcgctccaagtcgcctgagcacatg
aggaacatcatcgctctgtccattgaagctaccgctgctgatgttgaagcttatgacgac
tgcggccccaccaagcggacttttgcaaccttcggaaaagatgtcagtagccacccagct
gaggagcggtccatcctgaaaggcaagcggactgtcgatgtgaccatctgcagccccaaa
gtcaacagcgctatccgggaggcgggcaatggctgtgaagctattagccccgtcacctcc
ccactccatctgaagagccctctgcctaccaagccttccatgtcttacaccgtcgccctg
gctcctccagctcatgatctggatcaccatgccaacactggcgcctctcgtccttctgaa
gctgagccccgtggagccgacagcgagaaagtcatgcacgaggtcaatcctattctgaag
gaagggcgtgacaaggaatctcccgccgtgaagcgtctgaaggatatcattctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system