KEGG   Rattus norvegicus (rat): 317241
Entry
317241            CDS       T01003                                 
Symbol
Rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
  KO
K16271  E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    317241 (Rlim)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     317241 (Rlim)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    317241 (Rlim)
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX Prok-RING_4 zf-RING-like zf-RING_16 zf-RING_4
Other DBs
NCBI-GeneID: 317241
NCBI-ProteinID: NP_001020063
RGD: 1559832
Ensembl: ENSRNOG00000045695
Vega: OTTRNOG00000000430
UniProt: F7EY25 Q4V889
Position
X:complement(73048983..73070302)
AA seq 603 aa
MENSDSNDKGSDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGESTE
EELLRRLQQIKEGPPPQSSDENRAGESSDDVSNSDSIIDWLNSVRQSGNTTRSGQRGNQS
WRAVSRTNPNSGDFRFSLEINVNRNNGSQTSENENEPSTRRLSVESMESSSQRQMESHAS
ESTSARPSRAERNSTEALEVPLTRGQRRARSRSPEHRRTRARAERSRSPLHPTIEIPRRA
HHNISPQTLEQPLENEPEGSSRTRHHVTLRQQISGPELLGRGLFAASGSRNPSQGTSSSD
TGSNSESSGSGQRPPTIVLDLQVRRVRPGEYRQRDSIASRTRSRSQTPNNTVTYESERGG
FRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYS
DSDSEPSASVSSRNTERAESRNGRGSSGAGNSSASSSSPSPSSNGESSESSSDLFEGTSE
GGPSGPSRRDGRHRAPVAFDESGSLPFLSLAQFFLLNEDDEDQPRGLTKEQIDNLAMRSF
GENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNRE
SVV
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggagaactcagactctaacgataaaggaagtgaccagtctgcagctcagcgcagaagc
cagatggatcgattggatagggaagaggctttctatcagtttgtaaataatctcagtgaa
gaagattatagacttatgagagacaacaatttgctgggcaccccaggcgaaagtactgag
gaagagttgctcagaagactacagcaaattaaagagggtccaccaccacagagctctgat
gaaaatagagctggagagtcttcagatgatgtgtccaacagtgattctataatagattgg
cttaattctgtcagacaaagtggaaatacaacaagaagtggtcagagaggaaaccagtcc
tggagggcagtgagccggactaatccaaacagcggtgatttcagattcagtttagagata
aatgttaaccgtaataatggaagccaaacctcagagaatgaaaatgaaccatccactagg
cgtcttagtgtagaaagcatggaaagcagcagccaaaggcaaatggaaagtcatgcatct
gaatcaacatctgccagaccatctagagcagaacgcaattcaactgaagcattagaagtg
ccattgaccaggggtcagaggagggcaagaagccggagcccagaacatcggagaaccaga
gcaagagctgaaagaagtaggtcacctctgcatccaacaattgaaattccacgaagagct
caccataatatctcacctcagaccttggagcagcctttggaaaatgagcctgaagggagt
tctagaacccggcaccacgtgactctgagacagcagatatctggaccggagttgttaggt
agaggtctttttgcagcttctggatcaagaaatccctctcaggggacaagttcttcagac
acaggtagcaatagtgaatcatcaggatccggtcaaagacctccaaccatagttcttgat
cttcaagtaagaagagttcgtccaggagaataccgccagagagatagtatagctagtaga
actcgatcaagatctcagacgccaaacaacacagttacttatgaaagtgaacgtggaggt
tttagacgtaccttttcccgttctgaacgtgccggtgtgagaacctatgtcagcactatc
aggattcctattcgtagaatcttaaatactggattaagtgaaactacatctgtggcaatt
caaaccatgttaaggcagataatgacaggttttggtgagctaagctactttatgtacagt
gacagtgattcagagcctagtgcctcagtttccagccgaaatacagagagagcagaatca
cggaatggaagagggagctccggtgctggtaacagctctgcttccagctcaagccctagc
cctagttcaaatggtgaaagttcagaaagtagctcagatctgttcgaaggcactagtgaa
ggaggcccatctggcccatccaggagagatggtcgacatagggctccagtcgcatttgat
gaaagtggctctctgccattccttagtctggctcagttttttcttttaaatgaggatgat
gaagaccaacctagaggactcaccaaagaacagatcgataacttggcaatgagaagcttt
ggtgaaaacgacgcattgaaaacatgtagcgtttgcattacagaatatacagaaggcaac
aaactccgtaaactaccttgctcccatgagtaccatgtccactgcatcgaccgctggttg
tcagagaattccacctgtcccatctgtcgcagggctgtcttatcttctgggaacagagag
agcgttgtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (39)   

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