KEGG   Rattus norvegicus (rat): 317252
Entry
317252            CDS       T01003                                 
Symbol
Ercc6l
Name
(RefSeq) DNA excision repair protein ERCC-6-like
  KO
K20093  DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    317252 (Ercc6l)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     317252 (Ercc6l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 HDA2-3 SWI2_SNF2 TPR_2 TPR_11 TPR_1 TPR_8 DEAD_2
Other DBs
NCBI-GeneID: 317252
NCBI-ProteinID: NP_001092144
RGD: 1565734
Ensembl: ENSRNOG00000003208
Vega: OTTRNOG00000000653
UniProt: D4A0G9 A6IQE3
Position
X:complement(71285380..71301186)
AA seq 1230 aa
MEASQGLAEVGTLSPQLAESYLRYSQEAKEAAKNGDLEEALKLFNLAKDIFPTKKVISRI
QKLQEALEQLAEEEDDEFTDVCNSGLLLYRELYEKLFEHQKEGIAFLYSLYKNGRKGGIL
ADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTNLINTWVKEFAKWTPGMRVKTFHGSS
KNERIRNLTRIQQRNGVVITTYQMLLNNWQQLASFNGQAFVWDYVILDEAHKIKSASTKS
AVCARAVPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREK
DATPGEKALGFKMSENLMEIIKPYFLRRTKEEVHMKKADKPEVRPGEKNSGVEDICEMLS
LTRKNDLIVWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSAR
ACHLLNLGTVTFSAEDENEQEDASNMGSIDHLSDNALMQESGKMIFLMALLERLQDEGHQ
TLVFSQSRQILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQV
GGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQ
VFKDSLIRQTTGDKKNPFRYFTKQELKELFTVGDLLNSATQMQLQCLHAAQRKSDEKLDE
HIAYLHSLGIAGISDHDLMFTCDLSVKEELDMLEDAQYIQHRVQKAQFLVESESQNTKER
PSEENWLKAQEFPSQQRKKGNKPQPQPSRLLANPTQVEAISSQMASISIYDQSTESEPQE
LSEAHDVTSLQGDQHHFESTSDAGTIASLPQGAESIGGVWTDSLLSPAKGFAADNEAVQK
NELQASPGQEALSENLGSFHYLPRQSSKADLEPNLDVQDSVVLYHQSPTANENQNLESNE
PMIEISDDLSASPSALQGAQAMEAQLELKKDPLESPPQYECDFNLFLEDSADTRQNLSSK
FLEHVEKENSLQRPAGNSGEESAHNLSLDSSNKIDEESEVITVKTKNKARRILSDDEDEE
DAFKDTSTNSFSVSPLTFSSVKHFDASTPQNDSNPSRRFFSPKIPDDVNTSLHPRRSLAS
RRSLINVVLDDMEDMEERLDTSSEEESEPELSEDSNEEAVACTEEQRSGATLASGNKHSS
LTESEPTSPAPQSSPCAPEPSSSDPLLDPPQDPAVEAANDYESLVARGKELKECGKTQEA
LNCLVKALDIKSADPEVMRMTLSLYKQLNT
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggaggcttcccaaggtttagcggaagtggggactttgagcccacaactggctgagagt
tacctgagatattcgcaagaagccaaagaagcagctaagaatggagatctggaagaagca
ctgaaacttttcaatttggcaaaggacatttttcccaccaagaaggtgatcagcagaatc
cagaaactacaggaagctttggagcagttggcagaagaagaagatgatgaatttacagat
gtgtgcaactccggcttgctgctttaccgagagctctatgagaaactctttgagcaccag
aaagaaggcatcgcttttctctatagcctgtataagaatggaagaaaagggggcatctta
gcagatgatatgggattggggaaaactgttcagatcattgctttcctgtcaggtatgttt
gatgcttcacttgtgaatcatgtgctattgatcatgccaaccaatctcattaatacatgg
gtcaaagaatttgccaagtggactccaggaatgagagtcaaaacctttcatggctctagc
aagaatgaacgcattagaaacctgacccggattcaacagaggaatggtgttgtgatcact
acctaccaaatgttactcaataattggcagcaacttgcaagctttaatggacaagcattt
gtttgggactatgtcatccttgatgaagcccataagatcaaaagtgcctctaccaagtca
gcagtatgtgcccgagcagttcctgcaagtaatcgtctccttctcacaggaacaccaatc
cagaataatctgcaagaactgtggtccctgtttgattttgcttgccaaggctccttgtta
ggaacattaaaaacttttaaaatggagtatgaaaatcctattattagggcaagagagaag
gatgctacccctggggaaaaagccttgggatttaagatgtctgaaaacttaatggaaatt
ataaaaccctattttctaaggaggaccaaagaagaagtgcacatgaaaaaggcagacaag
ccagaggtcagacctggtgaaaagaattcaggcgtcgaagacatttgtgagatgctttcc
cttaccaggaaaaatgatttaattgtttggatacgtcttgtgcctttacaagaggaaatt
tataggaagtttgtgtctttagaccacatcaaggagttgttaatggagacacgctcacct
ctggctgagctgggtgtcttaaagaagctctgtgaccatcctaggctgctatctgcacga
gcttgtcatttgctgaatctagggactgtcacattctctgcggaggatgaaaatgagcaa
gaagatgcctcaaatatgggcagcattgatcacttaagtgacaatgcactgatgcaggag
tctggaaaaatgatattcttaatggccctgctagagaggcttcaagatgaaggacatcag
actctggtgttttcccagtcgaggcaaattctcaacatcattgagcgtctcttaaagaac
aagcactttaagacattgcgaattgatggcacagttactcatctttgggaacgagaaaaa
agaattcagttattccagcaaaataaagaatactcagtttttctacttaccactcaagta
ggtggtgttggactgacactgactgcagcatctagagttgtcatttttgaccctagctgg
aaccctgcaactgatgctcaagctgtggatagagtttaccgaattggacaaaaagagaat
gttgtggtttatcggctaatcacttgtggaactgtagaggaaaagatatatagaagacag
gttttcaaggactcgttgatcagacaaactactggtgataagaagaatccattccgctat
ttcaccaaacaggagctaaaggagctcttcacagttggggatctgctgaactctgcaacc
cagatgcagcttcagtgtctgcatgctgctcagcggaaatctgatgagaaactcgatgag
catatcgcctacctacactcgctgggcatagcaggaatctcagaccacgatttgatgttc
acctgtgatctgtctgttaaagaagagcttgacatgctagaagacgctcagtacattcaa
cacagagttcagaaagctcagttccttgttgaatctgagtctcaaaatacaaaggaaaga
ccaagtgaggagaactggctcaaagcacaggaatttccttctcaacagaggaagaaaggt
aacaaaccccagcctcagccttcacgccttctggctaatcctacgcaggtagaggctatc
agttctcaaatggccagtataagcatttatgatcagtctacagagagtgagccccaagag
ctctctgaggcacatgatgtcacttcactgcaaggtgatcagcaccacttcgaaagtaca
tctgatgctggcactatcgcttctttaccccagggggctgaaagtatagggggagtttgg
actgactccttattgagccctgcaaaaggttttgcagctgacaatgaagccgtgcagaag
aatgaattacaagcatcacctgggcaagaggccctgtcagagaacctgggaagttttcat
tatttacctagacagtccagcaaggctgatcttgagccaaatttagatgtacaggatagt
gtggttttatatcaccaaagtcccacagcaaatgaaaatcaaaacctagaatcaaatgaa
cccatgattgaaatatctgatgatttgtcagcatccccgagtgcactgcagggtgctcaa
gcaatggaggcccagttggaattgaaaaaggaccctttagaatcaccaccacagtatgag
tgtgacttcaatcttttcctggaagactctgcagacactagacaaaatctctccagcaaa
tttttggaacatgttgagaaagaaaatagcttgcaaaggcctgcaggtaactccggggaa
gagtcagcacataatctcagtttggattcttctaataaaattgatgaagaatcagaagtg
attactgtgaaaaccaaaaacaaagctagaaggatcctctcagatgatgaagatgaagaa
gatgcctttaaagatacttccacaaattcatttagcgtctctcccttaacattctcatct
gtcaaacactttgatgcttcaactccccaaaatgacagtaatccatctcgaaggttcttc
tcacctaaaatacctgatgatgtgaacacatccttacatcctaggaggtctctggcttct
aggaggtctctgatcaatgtggttttagatgacatggaagatatggaggaaaggcttgat
accagtagcgaggaggaaagtgaaccagagctttcagaagacagcaatgaagaagccgta
gcctgcactgaagagcagcgttccggggcaacactggcttcaggaaacaagcacagcagc
ctgaccgagtctgagcctacttctccagccccacaaagctctccctgtgcccctgaacct
tcatcaagtgaccctttgcttgatcctccccaggatccggcagtggaggctgctaatgac
tatgagagtcttgtagctcgtgggaaagaactgaaagagtgtgggaagacacaggaggct
ctcaactgcttagttaaagcacttgatataaaaagtgcagatcctgaggtcatgcgcatg
actctgagtttgtataagcaacttaacacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (26)   

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