KEGG   Rattus norvegicus (rat): 317346
Entry
317346            CDS       T01003                                 
Symbol
Bcor
Name
(RefSeq) BCL-6 corepressor
  KO
K23215  bcl-6 corepressor
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    317346 (Bcor)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    317346 (Bcor)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     317346 (Bcor)
SSDB
Motif
Pfam: BCOR PUFD Ank_2 Ank Ank_4 Ank_3 Ank_5
Other DBs
NCBI-GeneID: 317346
NCBI-ProteinID: NP_001178515
RGD: 1562735
Ensembl: ENSRNOG00000034240
UniProt: D4A2J9
Position
X:13282431..13402254
AA seq 1757 aa
MLSATPLYGNVHSWMNSERVRMCGTSEDRKIPVNDGDASKARLELREENPLNHNVVDTSG
AHRIDGLAALSMDRTGLIREGLRVPGNIVYSGLCGLGSEKGREATPSSLSGLGFSSERNP
EMQFKPNTPETVEASAVSGKPPNGFSAIYKTPPGIQKSAVATAESLGLDRPASDKQSPLN
INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYGLAQPLYSPVCTS
GERFLYLPPPHYVNPHIPSSLASPMRLSTPSASAAIPPLVHCSDKSLPWKMGVNPGNPVD
SHTYPHIQNSKQPRVTSAKAVNSGLPGDAALLLPPSPRPSTRVHLPTQPAAESYSEFHKH
YPRISTSPSVTLTKPYMTASSEFPTARLSSGKYPKALDGGDCAPSMSGHSRKTTVQDRKD
GGSPPLLEKQTVTKDVTDKPLDLSSKVVDVDTSKTDHMKKMAPTVLVHSRATSGLVLSGS
EIPKETSPPGNGCSIYRSEIISTAPSSWVVPGPSPNEENNGKSLSLKNKALDWAIPQQRS
SSCPRMGGTDAVITNVSGSVSSSGRPASASPAPNANADGTKTSRSSVDTTPSVIQHVGQP
PSTPAKHSGSTSSKGAKASNPEPSFKASENGLPPTSIFLSPNEAFRSPPIPYPRSYLPYP
APEGIALSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLHTSRPEFVTYQDALG
LGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRSRFSEILEASSAKLHPDVPT
EKNLKPNPSWNQGKTGAKSDKLVYVDLLREETEAKADAGASKAGLVAENAGQNTDAAKPS
ADPVIQQHREFISLREELGRITDFHESFTFKQAPGQPVFSLGKDSVAAGSNKENLGVQVA
TPFLETALGSEGPAVTFGKTQEDPKPFCVGGAPPSMDVTPAYTKDGTDEAESNDGKVLKP
KPSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCE
RAMMRFSELEMKEREVSHPATKDSEVCKFSPADWERLKGNQEKKPKSVALEEAIADQNDT
ERCDCSTGNKHDLFEAPEDKDLPVEKYFLERPPVSEPPTDQGVVDMSHSPTLRLDRKRKA
SGDSTHTETTVEELTEDPLKAKRRRISKDDWPEREMTNSSSNHLEDPHCNELTNLKVCIE
LTGLHPKKQRHLLHLRERWEQQVSAAESKPGRQSRKEVTQAVQPEVTSQGNNITEERPGR
KKAEAKGNRGWSEESLKSCDNEQGLPVFSASPPMKSLSSTNASGKKQTQPSCTPASRPPA
KQQKIKESQKTDVLCTEEDEDCRAASPLQKYTDNIEKPSGKRLCKTKHLIPQDSRRSVQI
TGEYYVENTDTKMTVRRFRKRPEPSTDYDLSPPAKQEPKPFDRLQQLLPATQATQLPRSN
SPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAGY
CALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPTL
ATYSGRTIMKMTHSELMEKFLTDYLNDLQGRSEEDTSGAWEFYGSSVCEPDDESGYDVLA
NPPGPEDPDEEEDAYSDMFEFEFAESSLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSSR
IFRCNFPNMEIVSIAEAEFYRQVSTSLLFSCPKDLEAFNPEGKELLDLVEFTNELQTLLG
SSVEWLHPSDTGHENYW
NT seq 5274 nt   +upstreamnt  +downstreamnt
atgctttcagcaactcctctgtatgggaacgttcacagctggatgaacagcgagagggtc
cgcatgtgtggaacaagtgaagacaggaaaattcctgtgaatgatggcgatgcttcaaaa
gccaggctggagctgagggaggagaatcccttgaatcacaacgtggtggataccagtgga
gcccatcggattgacggcctggcagcactgagcatggatcgcacaggcctcatccgggaa
gggctccgcgtccctggaaacatcgtttattctggcttgtgtggattgggctcagaaaaa
ggtcgggaggctaccccaagctctctcagtggccttgggttttcttcggaaagaaatcca
gagatgcaattcaaaccgaatactcctgagacagtggaggcttctgctgtctctggaaaa
cccccaaatggcttcagtgctatatacaaaacaccacctgggatacaaaaaagtgctgta
gccacagcagaaagcttgggtttggataggcctgccagtgacaaacagagccctctcaac
atcaacggtgctagttacctgcggctgccctgggtcaacccttacatggagggggccact
ccagccatataccctttcctcgactcgccaaataagtattcactgaacatgtacaaggcc
ttgctacctcagcagtcctacggcttggcccagccgctgtattctcctgtctgcaccagt
ggggaacgcttcctctacctgccacccccacactatgtcaacccccacatcccgtcctcc
ttggcttcgcccatgaggctctctacaccttcggcttctgcagccattccacctctcgtc
cactgctcagacaaaagcctcccgtggaagatgggcgtcaaccctgggaacccagttgat
tcccacacttatccccacatccaaaatagtaagcagccccgggtgacctctgccaaggca
gtcaatagtggcctgccaggagacgcagctctcctgttgcccccgtcacctcggccttca
acccgggtccaccttccaactcagcccgctgcagagtcctactccgagttccacaagcac
tatcccaggatctccacctccccctcagtcaccctgacgaagccatacatgacagccagt
agcgagttccccacagccaggctgtccagtggcaagtaccccaaggctctagatgggggt
gattgtgccccatccatgtctgggcactcccggaagacaacggttcaagacagaaaagat
ggtggctcaccgcctctgttggaaaagcagaccgttaccaaagacgtcacagacaaaccg
cttgacctgtcttctaaagtggtggacgtggatacttctaaaaccgaccacatgaaaaag
atggctcccacagttctggttcacagtcgggctacaagtggattagtgctctctggaagt
gagattccaaaagaaacatctcctccgggaaatggctgttctatctatagatcagagatc
atcagcactgccccctcatcctgggtggtgccagggccaagtcctaatgaagagaacaat
ggcaagagcctgtcactgaaaaacaaggctttggactgggcaataccgcaacagcggagt
tcctcgtgtccccgcatgggcggcacagatgctgtgatcactaatgtttcaggttccgtg
tccagctcaggacgcccagcctctgcatcaccagcccccaacgccaatgcagatggcacc
aagaccagcaggagctctgtggataccacgccatcagtcatccagcatgtgggccagccc
ccatccacgcctgccaagcacagtggcagcaccagcagcaagggagccaaagccagcaac
ccagaaccgagtttcaaagcgagtgagaatggcctcccgccaacctcaatatttctatct
ccaaatgaagcattcaggtccccaccaattccctaccctaggagttacctcccttaccca
gcaccagaaggcatcgctctaagtcccctctctctacatggcaaaggaccggtgtatcct
cacccagttttgttacccaatggcagtctgtttcctgggcatcttgcccccaagcctggc
ctgccctatgggctgcacacaagccggccagaatttgtcacttaccaagatgccctaggc
ctgggcatggtacatcccatgttgatcccacacacacccattgagatcacaaaagaggag
aagccggagagacggtcccgctcccatgagagagcccgttatgaggacccaaccctccgt
agccggttttctgagatattggaagccagcagcgccaaactacatccagacgtccccact
gaaaagaacctgaagccaaaccctagctggaatcaagggaaaactggggccaaaagcgac
aagctagtctacgtagaccttctccgagaagaaacagaggctaaagctgatgcaggggca
tccaaagcaggccttgtagctgagaatgcgggtcagaacacagatgccgccaagccctca
gctgaccccgtgatccagcaacaccgtgaattcatctccctcagagaggaactgggccga
atcactgacttccacgaatctttcactttcaaacaggccccgggccagccagtgttcagc
ttaggcaaggatagtgtggcagcaggaagcaacaaggagaacctgggggtgcaggtagca
actccattcttggagacagctctgggcagcgagggccctgctgtgacttttgggaaaacc
caagaggatcccaaaccattttgtgtgggcggtgcccctccaagcatggatgtcaccccc
gcctataccaaagatggaaccgatgaggccgaatcaaacgatggcaaagttctcaaaccg
aagccatccaagctggcaaaaagaattgctaactcagcaggttatgtgggcgaccgattc
aagtgtgtcaccaccgaactgtatgcagattctagtcagctcagccgagagcagcgggca
ttgcagatggaaggattacaagaggacagtattttatgtctacctgctgcttactgtgag
cgtgcaatgatgcgcttctcagagttggagatgaaagagagagaagttagccacccagca
accaaagactccgaggtgtgcaaattcagcccagccgactgggaaaggttaaaaggaaat
caggagaagaagccaaagtcagtcgccctggaagaggccattgccgaccagaacgacact
gagagatgtgactgtagtactggaaacaaacatgatctctttgaagccccagaggacaaa
gaccttcctgtggaaaagtatttcttggagaggccgcctgtgagtgagccacccacggac
cagggggtggtggacatgtcacacagccccaccctccggctagacaggaaacgcaaagcg
tcaggtgacagcacccacactgagaccactgtggaggagctaactgaagaccctctgaaa
gccaagcggagacggatctccaaagatgactggcctgagagggaaatgacaaacagttcc
tctaaccacttagaagacccacattgtaatgagctgaccaacctgaaggtgtgcattgaa
ttaacagggctccatcctaaaaagcagcgccacttgctgcaccttagagaacggtgggag
cagcaggtgtcggcagccgagagcaaacctggccggcaaagcaggaaggaagtgacccag
gctgtgcagcctgaggtcacctcccaggggaataacatcactgaagagaggcctggcagg
aagaaggcagaggccaaaggcaacagaggctggtctgaagagtccctcaaatcctgtgac
aatgagcaaggcttgcctgtgttctccgcctctccgcccatgaagagcctttcatccacc
aatgcaagtggcaaaaagcagactcagccaagctgcacgccagcctcgaggccgcctgcc
aagcagcagaaaattaaagaaagccagaagacagatgtgctgtgcacagaggaagacgag
gattgccgggctgcctccccgctgcaaaaatacacagacaacatcgagaagccatccggg
aagagactgtgcaaaaccaagcacttgatacctcaggactccaggaggagtgtgcagatc
acaggagaatactatgtggagaacactgacaccaagatgactgtgcggagattcagaaaa
cgacctgagcccagcacggactatgatttgtcaccaccagccaagcaggagccaaagccc
tttgaccgtttgcaacaattgctaccggccacccaggccacacagctgccacgctcaaat
tctcctcaagagaccacccagtctcgccccatgccgccagaagctcggagacttattgtc
aataagaatgctggcgagaccctccttcagcgggctgcccgcttaggctatgaggaagtg
gtcttatattgcctggagaacaaggtctgtgatgtcaatcatcgagataatgctggttac
tgtgctctgcacgaagcttgtgccaggggatggctcaacatcgtgcgccacctccttgaa
tatggcgctgatgtcaactgcagtgcccaggatggaaccaggcctttgcatgatgccgtg
gagaatgaccacttagaaatcgtccgattgcttctttcctatggtgctgaccctactttg
gccacatactcagggagaaccatcatgaaaatgacccacagtgaacttatggagaagttt
ttaacagactatttaaatgacctgcagggtcgcagtgaggaggacaccagtggcgcttgg
gagttctatggcagctctgtgtgtgaaccagatgacgaaagcgggtatgatgttttggct
aaccccccaggacccgaagacccagatgaggaggaggatgcctatagtgacatgtttgag
tttgagtttgcggagagctccctcttgccgtgttataacatccaagtgtccgtcgctcag
gggccacgaaactggctactgctctcagacgtgctcaagaagttgaaaatgtcctcccgg
atattccgttgcaattttcccaatatggaaattgtcagcattgcagaggcagagttttac
cgacaggtctctacgagtctcttattctcctgccccaaagacctggaagcctttaaccct
gaaggcaaggagctgttggatctggtggaattcaccaatgagctccagacactgctgggc
tcctccgtggagtggctccaccctagtgacacgggccatgaaaactactggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   UniProt (1)   
   RefSeq(pep) (14)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (7)   
   Pfam (7)   
All databases (46)   

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