KEGG   Rattus norvegicus (rat): 317391
Entry
317391            CDS       T01003                                 
Symbol
Shroom4
Name
(RefSeq) protein Shroom4
  KO
K18625  protein Shroom
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    317391 (Shroom4)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     317391 (Shroom4)
SSDB
Motif
Pfam: ASD2 PDZ TFIIA PDZ_6
Other DBs
NCBI-GeneID: 317391
NCBI-ProteinID: NP_001178659
RGD: 1563434
Ensembl: ENSRNOG00000002959
UniProt: F1LVL5
Position
X:complement(18537371..18748665)
AA seq 1487 aa
MENRPGSFQYVPVQLQGGAPWGFTLKGGLEHCEPLTVSKIEDGGKAALSQKMRTGDELVN
INGTPLYGSRQEALILIKGSFRILKLIVRRRNTPVSRPHSWHVAKLLEGCPDVATTMHFP
SEAFSLSWHSGCNTSDVSVQWCPLSRHCSTEKSSSIGSMESLEQPGQATYEGHLLPIEQN
MYPSQRDSAYSSFSASSNASDCALSLKPEEPPSTDCVMSGPGPTKVTDDQANVSETSGSS
HSTSGGHMTSTSHASSCSEEGHHSGPAKMVRGPPEPPVRRDSLQASRAQLLNGEQHRASE
PVDSLQQKEKPALETMLPPRSSNQFCCISGQDQVTGEDHQNCELSKPSESSQDDCDHLLI
EGSSKALDSPKAHDKGSNKEFGLLKEASADLANTLSFGAIPHLRGSIEHRHSAPEQLLAS
HLQQMHLDSRGNKGMELPTGQDGHQWTMSPLHNNPKGKKSPGLPTGGTQDQTSKERKIKP
TDDKLMVSANQSQSDALLGEVDGHPSERTYLDSNRASRASSDLTGQQPSATCSPVQQTRD
FFSANKVVGHTEATEEGDNEPKEGGRLGGRRSGGPRGRSIQNRRKSERFATNLRNEIQRR
KAQLQKSKGPLSQLCDTKEDVEETQEPPESPPLPASNSSLLPSYKNVPSHGDQLFNKSMI
LRARSSECLSQASESSKARVGLEGRMSPGQRSGQSSLALNTWWKASDSSTLDTEKANAHH
GVCRGHWRWSPEHNAQPQVALSTEGPSNPDDNKELKIPTPQAGDEAILMPFADRRKFFEE
SSKSLSTSHLPGLTTHNKPFIQRPKPIDQNFQSVSYRELRCHPMDQSYHSADQPYHAADQ
SYHSLSPLQSEAPTYPDCFAPKGVDNSLYCKPVHHGDCDYHRTCSHPCSAQGTVMHDPCI
CCSGEICPALLKRNLLPKCHNCRCHHHQCIRCTGCCHSPQHGAHEDSSMASGNAWKSRKA
AIQEFPVDKWKPITGNRKTSHSGREMAHSKANLSLSAPFRPHIENSALDLSNYRAVSSLD
LLGDFKHASNTPEESSVYEDESSVASMPRPLRSRAFSESHISLEPQNTRAWGKQQRESFS
KGSETQPDTLGARKKAFPPPRPPPPNWEKYRLFRAAQQQQQQQQQQQQQQQQQQQQCEKE
EEEEKEQEEKGEKEEDLPPQYFSSETTGSCAPITEEQPQSLKMGHQEASRQSSQSLQEQE
AYAVHPSNFVPAVRSYPVTQPEKAQPPCYYGAHGLWRTTEQEATVTPKQEFQHFSPPTGA
SGIPTSYSAYYNISVAKAELLNKLKQQPEMAEAGLGEEGVDYELAQKKIQLIESISRKLS
VLREAQRGLLDDINANAALGEEVEVNLKAVCKSNELEKYHLFIGDLDKVVNLLLSLSGRL
ARVENALNSIDAESNQEKLVLREKKQQLTNQLADAKELKEHVDRREKLVFSMVSRYLPQD
QLQDYQHFVKMKSALIIEQRELEEKIKLGEEQLKCLKESLHLGPSNF
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggagaaccggccggggtccttccagtacgtcccggtgcagctgcaagggggggcgccc
tggggcttcaccctgaaggggggcttggagcactgcgagccgctcacggtgtcgaagatt
gaagatggaggcaaggcagccttgtcccagaagatgcggactggtgatgaactggtaaat
atcaatggcactccattgtatggctcccgccaagaggccctcatcctcatcaaaggctcc
ttcaggatcctcaagctgattgtcaggaggagaaacacccctgtgagtaggccgcactca
tggcatgtggccaagctattggaggggtgccctgacgtggccaccaccatgcatttccct
tctgaagccttcagcttgtcctggcattctggttgcaacacaagtgacgtgagtgtacag
tggtgcccactctcccggcattgtagcactgagaaaagcagctctattggcagcatggag
agcctggaacagccaggccaagctacctacgagggccacctcttacccattgagcagaac
atgtaccccagccagcgtgactcagcctacagctccttctcagccagctcaaatgcctct
gactgtgccctttcccttaagccagaggaaccaccctctacagactgtgtcatgtcaggc
ccagggccgactaaagtcactgatgaccaagctaatgtatctgagacctcaggaagtagc
catagtaccagtgggggccacatgacctccacttcccatgcatcatcctgctcagaagaa
gggcaccactcaggacctgccaagatggtgcggggtccaccagagcctccagtgaggcgg
gacagccttcaggcctctagagcccaacttctcaatggagagcagcatcgtgcatctgaa
cctgtggactccttacagcaaaaggaaaaaccagccttagagacaatgctgcccccaagg
agctctaaccagttctgctgcattagtgggcaagaccaggtgacaggtgaggaccaccag
aactgtgagctcagcaagccttctgaatccagccaggatgactgtgaccatctactgata
gagggctcctccaaagctcttgattctccaaaggcccatgacaaaggttccaacaaagag
tttggcctgcttaaggaggcttcagcagatctggctaacactttgtcttttggtgccatc
ccgcacctccgaggaagcatagaacatcgccatagtgctcctgaacagctgttggcatcc
cacttgcagcagatgcaccttgattccagaggcaacaaggggatggagttgccaactggg
caggatggacaccagtggaccatgtcccctttgcacaacaaccctaaagggaagaaaagt
ccaggtctccccacaggaggtacccaggaccagaccagcaaagaaaggaagatcaagccc
acagatgataagctgatggtttctgcaaaccagagccaaagtgatgccctacttggagag
gtcgatggacacccatcagaacgaacttacctagactcaaaccgagcaagcagagcaagc
agtgacttgactggccagcagccctctgccacttgctcccctgttcaacaaaccagagac
ttcttttcagccaataaagtagttggtcacactgaagcaactgaagaaggtgacaatgag
cctaaggaaggtggccgattgggtggcagaagaagtggaggcccccgaggtcgctccatc
caaaaccgacggaagagtgagaggttcgctaccaatctacggaatgaaattcagaggagg
aaagcccagctccagaaaagtaagggccccttgtcacaattgtgtgacactaaggaagat
gtggaagagacccaagagcctccagaaagccctccactccctgcttctaactcatccctt
ctgccttcatataaaaacgtccctagccatggagatcagctctttaacaaaagcatgatt
ctcagggctaggtcttcagaatgcctcagccaagcctcagagagctctaaagctagggta
ggcttagagggaagaatgagccctggccagaggtctggccagtcttctttggccctgaac
acatggtggaaggcatctgactcatccaccttagacactgagaaagcaaatgctcaccac
ggggtctgtagaggtcactggagatggtctccagaacataacgcacagccacaggtggca
ctctccacagagggtccttccaacccagatgacaacaaagaattgaagatacctactcct
caggctggggatgaagccatcctcatgccatttgcagacagaagaaagttctttgaagag
agcagcaaatctttatctacatctcatttgccaggcttaaccactcacaacaagccattt
atccagagaccaaaacctatagatcaaaacttccagtcagtgagctatagggaattacga
tgccatcctatggaccaatcatatcattctgcagaccaaccataccatgctgctgaccaa
tcatatcattccttgtcaccacttcagtcagaagctcccacttacccagactgctttgct
cccaaaggcgtagataattccctgtactgtaagccagtgcaccatggggattgtgattac
cacaggacctgttctcatccctgcagtgctcagggaactgtaatgcatgatccttgcatt
tgctgttctggagaaatttgccctgccttgctaaagagaaatttgttgccaaaatgccac
aactgtaggtgtcaccatcaccaatgcatccggtgtacaggttgctgtcacagtcctcag
catggtgcccatgaggacagcagtatggcatctggcaatgcttggaaatccaggaaggca
gccatacaggaatttcctgtggacaagtggaagccaataacaggaaacaggaaaactagt
cattccgggagggaaatggctcattctaaggccaacttgtcattgtctgctcccttccgg
cctcacattgagaactcagcactggacttgtcaaactaccgagcagtctcttcgcttgac
ctccttggagacttcaaacatgcctcgaacactccagaggaatcttcagtttatgaggat
gagagctccgttgcctccatgccccgcccactgcggagccgagccttctctgagagtcac
atcagtttagagccacaaaacacccgggcctgggggaaacagcaaagggaatcatttagt
aaaggcagtgagactcagccagatactcttggggcccgaaagaaggcctttcctccccct
cgccctcctcctcccaattgggaaaaatataggctctttcgtgcagcgcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcaatgtgaaaaggaa
gaagaggaggagaaggagcaagaggagaagggagagaaagaagaggacctaccgccccag
tattttagttcagaaaccactggatcatgtgcccctattacagaggagcagccacagtcc
ctgaagatgggccaccaggaagcctcaaggcagagttcacagagcctccaagagcaagag
gcctatgctgtgcatcccagcaattttgtgcctgcagtaaggagctaccctgtaacccag
cccgagaaagctcaacctccttgctattacggcgctcatggactgtggaggacaactgag
caagaagctactgtgaccccaaaacaagagtttcagcacttctcacctcctacaggggcc
tcaggaatccctacctcttactcagcttattataatatctctgtggccaaggcagaactg
ctgaacaagttaaaacagcagcctgagatggctgaggcaggcctgggagaggagggagtt
gactatgaactggctcaaaaaaagattcagctcattgaaagcattagtagaaaactttct
gtcctgcgggaggcccagcgtgggctactggatgacatcaatgccaacgctgcccttgga
gaggaggtggaggtcaacttaaaagctgtctgcaagtccaatgagttggaaaagtatcat
ttgtttattggagacctggacaaagtggtcaacctgttgttgtcactctctggacgactg
gcccgggtagagaatgctctcaacagcatcgatgctgagtccaaccaggagaagttggtg
ctgagagagaagaagcagcagctgacgaaccagttggcagatgccaaagagctgaaggag
catgtggaccgcagggagaagctggtgttcagcatggtctcccgctacctgccgcaggac
cagctccaagattaccagcactttgtgaagatgaaatctgctctcatcattgagcagaga
gagctggaggagaagatcaaacttggagaagaacagcttaaatgcctcaaagagagcctg
cacttggggcccagcaatttctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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