KEGG   Rattus norvegicus (rat): 317425
Entry
317425            CDS       T01003                                 
Symbol
Phf8
Name
(RefSeq) histone lysine demethylase PHF8
  KO
K19415  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65 1.14.11.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    317425 (Phf8)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     317425 (Phf8)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    317425 (Phf8)
SSDB
Motif
Pfam: JHD JmjC Cupin_8 PHD ASH2L-like_WH PHD_5 JmjC_2 PHD_2
Other DBs
NCBI-GeneID: 317425
NCBI-ProteinID: NP_001101723
RGD: 1561065
Ensembl: ENSRNOG00000002708
UniProt: D4AD31 A6KLA6
Position
X:23967126..24066473
AA seq 1023 aa
MASVPVYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHGPS
IMKKRRGSSKGHDNHKGKPLKTGSSMFIRELRGRTFDSSDEVILKPTGSQLTVEFLEENS
FSVPILVLKKDGLGMTLPSPSFTVRDVEHYVGSDKEIDVIDVARQADCKMKLGDFVKYYY
SGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVR
DSYTDFHIDFGGTSVWYHVLKGEKIFYLIRPTNANLTLFECWSSSSNQNEMFFGDQVEKC
YKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFK
FPNFETICWYVGKHILDIFRGLRENRRHPASYLVHGGKALNLAFRAWTRKEALPDHEDEI
PETVRTVQLIKDLAREIRLVEDIFQQNVGKTSNIFGLQRIFPAGSIPLTRPAHSTSVSMS
KLSLPSKNGSKKKGLKPKDIFKKAERKGKQSSALGPAGQLSYNLMDPYSHQALKTGPSQK
AKLNIGGACLNDSDDDSADMDVDGSENPLALLMANGSTKRMKSVSKSRRAKIAKKVDSAR
LVAEQVMGDEFDLDSDDELQIDERLGKEKANLLMRSKFPRKLPRAKPCSDPNRIREPGEV
EFDIEEDYTTDEDMVEGVESKLGNGSGAGGILDLLKASRQVGGPDYAALTEAPASPSTQE
AIQGMLCMANLQSSSSSPATSSLQAWWTGGQDRSSGSSSSGLGTVSNSPISQRTPGKRPI
KRPAYWKNESEEEENASMDEQDSLGACFKDAEYIYPSLESDDDDPALKSRPKKKKNSDDA
PWSPKARVTPTLPKQDRPVREGTRVASIETGLAAAAAKLAQQELQKAQKKKYIKKKPLLK
EVEQPRPQDSNTTMTMPAPTLATTPQPVTSSSPQPPPEPKQEALSGSLADHEYTARPNAF
GMAQANRSTTPMAPGVFLTQRRPSVGSQSSQAGQGKRPKKGLATAKQRLGRILKIHRNGK
LLL
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggcctcggtgcctgtgtattgcctctgtcgactgccttacgatgtgacccgcttcatg
atcgagtgtgacatgtgccaggactggtttcacggcagttgtgttggtgttgaggaggag
aaggctgctgatattgatctgtaccattgccccaactgtgaagtcttacacggaccctcc
attatgaaaaaacgtcgtggatcttccaaaggacatgataatcacaagggtaaaccattg
aagactgggagctccatgtttatccgagaactacggggtaggacttttgacagctcagac
gaagtgattctgaaacccactggaagtcagctgacagtggaattcttggaagagaatagc
ttcagcgtgcctatccttgtcttgaagaaggatggcttggggatgacattaccctctcca
tcattcactgtgagggatgtggagcactatgttggttctgacaaagagattgatgtgatt
gatgtggcccgccaggctgactgcaaaatgaaacttggtgattttgtcaaatactattac
agtgggaagagggaaaaagtcctcaatgtcattagtttggaattctctgataccagactt
tcaaaccttgtggaaacacccaagattgttcgaaagctgtcgtgggtggagaacttgtgg
ccggaggaatgtgtctttgagaggcccaatgtgcagaagtactgcctcatgagtgtgcgg
gatagctatacagattttcacattgactttggtgggacctcagtttggtaccatgtgctt
aagggtgagaagatcttctacctgatccgcccaacaaatgctaatctgactctctttgag
tgctggagcagctcctctaatcagaatgagatgttctttggtgaccaggtggaaaaatgc
tacaagtgttctgtgaagcaaggacaaacactgtttattcctacagggtggatacatgct
gtgctaacaccagtggactgcttagcctttggagggaactttttacatagccttaacatt
gaaatgcaactcaaggcctatgaaattgagaagcggctgagcacagcagaccttttcaag
tttcccaacttcgagaccatctgttggtatgtgggaaaacatattctggacatcttccga
ggcttacgagagaacaggagacatcctgcctcctacctggtccatggtggtaaagctctg
aacttggcctttagagcctggacaaggaaagaagctctgccagaccatgaggatgagatc
ccagagacagtgcggactgtacagctcattaaagatctggctagggagatccgcctggtc
gaagacatcttccaacagaacgttgggaagacgagcaatatctttgggctgcagaggatc
ttcccagctggttccatccccttaaccaggccagcccattccacttcagtatccatgtcc
aagctgtcactgccctccaaaaatggttcaaagaagaaaggcctgaagcccaaggatatc
ttcaagaaggcagaacgaaagggcaagcagagttcagccttggggcctgctggccagttg
agctataatctcatggacccatacagtcatcaggcactgaagacaggcccttcccagaaa
gcaaagctcaacattggtggtgcctgcttgaatgactcagatgatgactcagcagacatg
gacgttgatggcagtgagaaccccctggccctgttgatggctaatggcagtacaaagagg
atgaagagtgtatccaagtctcgaagagccaaaattgcgaagaaggtagacagtgcaaga
ctggtagcagaacaggtcatgggggatgaatttgacttggactcagatgatgagctgcag
attgatgagagactgggaaaggaaaaagcgaacctgttaatgagatcaaaatttccccgg
aaattgccccgtgcaaaaccttgctctgaccccaaccgaattcgtgaacctggagaagtt
gagtttgacattgaggaggactatacaacagatgaggacatggtggaaggggttgaaagc
aagcttggtaatgggagtggagctggtggaattcttgatctacttaaggccagcaggcag
gtcgggggacctgactatgctgccctcactgaggccccagcctcccccagcacacaagag
gccatccagggcatgttatgtatggccaacctgcagtcctcatcatcctcaccagctacc
tccagtctgcaggcttggtggaccggagggcaagaccgaagcagtgggagctccagcagt
gggctgggcactgtgtctaatagtcctatttcccagcgcaccccagggaagcggcccatc
aagaggccagcatactggaaaaacgagagtgaggaggaagagaatgccagtatggatgaa
caagacagcttgggagcatgcttcaaggatgctgagtatatctatccatccctggagtct
gatgatgatgaccctgctttgaaatctcgacccaagaaaaagaagaattcagatgatgct
ccatggagtcctaaagcccgtgtgactccaactctacccaagcaggaccgtcctgttcgt
gaaggaaccagagttgcctccattgagacaggcttggctgcagcagctgcaaagcttgcc
cagcaggagctgcaaaaggcccaaaagaagaaatatatcaagaagaagcctttgctgaag
gaggtagaacagcctcgccctcaagattccaataccaccatgacaatgcctgcaccaaca
ctggctactacaccccagcctgtcacctcctcctcaccccagccacctcctgagcctaaa
caagaggctctgtcaggaagtcttgctgaccatgagtacactgctcgtcccaatgccttt
ggcatggctcaggcaaatcgcagcaccacacctatggcccctggagtcttcctcacccag
cggcgcccttcagttggttcccagagcagtcaggcaggacaaggaaagcgtccgaaaaag
ggcctggccacagcaaagcaaagactcggccgcatcctgaaaatccacagaaatggcaag
ttacttctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (15)   
   UniProt (2)   
   RefSeq(pep) (13)   
DNA sequence (15)   
   RefSeq(nuc) (13)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

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