KEGG   Rattus norvegicus (rat): 317517
Entry
317517            CDS       T01003                                 
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
  KO
K24682  patched domain-containing protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    317517 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Patched domain-containing proteins
   317517 (Ptchd1)
SSDB
Motif
Pfam: Patched Sterol-sensing
Other DBs
NCBI-GeneID: 317517
NCBI-ProteinID: NP_001178663
RGD: 1564527
Ensembl: ENSRNOG00000069252
UniProt: A0A8I5ZYJ0
Position
X:43496907..43548413
AA seq 888 aa
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSYQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAHQKYFNNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STDLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMLDIDSTRVVDQITTV
NT seq 2667 nt   +upstreamnt  +downstreamnt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctcccggcttggccacttc
attgccagtcacccggtcttcttcgcttcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtggaagagagcgtggagcacctgctggcgccccagcac
agcctagccaagatcgagcgcaacctagtcaacagcctattcccggtcaaccgctccaag
caccggctctactcggacctgcagacccctgggcgctacggccgggtcattgtcacctcc
taccagaaagccaacatgctagaccagcatcacacggacctgatcttaaagttgcacact
gctgtaaccaagatccaggttccaaggcctggctttaactatacatttgcccacatatgt
gtcctgaataatgataagacttgcattgtggatgacatagtacacgtcctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacatatccgatcactcactta
aaggatggaagggctgtctataatgggcaccaacttggaggtgtcactgtgcacagcaag
gatcgggtgaaatctgcggaggccattcagctcacctactatctgcaatcaatcaacagt
ctcaatgacatggtagctgagaggtgggagtccagcttctgcgacactgtcaaattattc
cagaaatccaacagcaaagtcaaaatatacccgtacacatcctcatcactgagggaagat
ttccagaagaccagccgtgtgtcagaacgttacctggtcaccagtctgatccttgtagtc
accatggccattctgtgctgctctatgcaggactgtgtccgcagcaaaccctggttaggc
ctacttgggttggtgaccataagcctagccactctcactgcagctggaatcatcaatctt
actggtggaaaatacaattccaccttcctgggagtccctttcgtcatgctaggtcatgga
ttatacgggacttttgaaatgttatcctcgtggagaaaaactagagaggaccaacatgtt
aaagagcgaactgcagaagtctatgcagactccatgctctccttctctctcaccactgcc
atgtacttggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaattcctgtattgcaatcctcttcaactacctctatgtactctcattt
tacggttccagccttgtgttcactggctacatagaaaacaattaccagcatagtatattc
tgtagaaaagttccaaagcctgaggtattacaggagaagccagcatggtataggtttctt
ctgacagctagattcagtgaggacacagctgaaggtgaggaagcaaacacttatgagagt
catttattggtatgtttcctcaaacgttattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacacaaaccattgag
tacactactgcccaccaaaagtactttaacaactacagtcctgttattgggttttacata
tatgagtccatagaatattggaactctagtgtccaagaagatgttctagagtacactaag
ggttttgtgcggatatcctggtttgaaagctatttaaattatcttcggaaactcaatgtg
tccactgacttgcctaagaaaaatttcacagacatgttgagaaattccttcctgaaagct
cctcaattttcacattttcaagaggacatcatcttctctaaaaaatacaatgatgaggtt
gacgtagtggcctctagaatgtttttggtggccaagactatggaaacaaacagagaagaa
ctttatgatctcttggagaccctgaggaggctttcagtcacctccaaggtgaagttcatt
gtctttaatccgtcttttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtagcagat
tcgctgattaatgtctggatcactctaacggttgtgtctgtggagtttggagtgataggc
ttcatgacattatggaaggtcgaactggattgtatttctgtgctatgcttaatttatgga
attaactacacaattgataactgtgctccactgttatccacatttgtcctaggcaaggat
tttacaagaactaaatgggtaaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgttatattgttggtctatttcctctcgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcctgaaaaccgggaggaaattgagtgtgtagaaatgttggatattgacagtactcga
gtggttgaccaaattaccacagtgtga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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