KEGG   Rattus norvegicus (rat): 317612
Entry
317612            CDS       T01003                                 
Symbol
Htatsf1
Name
(RefSeq) HIV Tat-specific factor 1
  KO
K13093  HIV Tat-specific factor 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    317612 (Htatsf1)
Spliceosome [BR:rno03041]
 Complex A
  Other components
   Complex A specific factors
    317612 (Htatsf1)
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 317612
NCBI-ProteinID: NP_001101729
RGD: 1563377
Ensembl: ENSRNOG00000027761
UniProt: A6KSQ2 D4A997
Position
X:139972742..139986923
AA seq 776 aa
MSGSNLSGNDEFDEQLRMQELYGDPKEGDTQNEPSGETDSLGQPPDDTPYEWDLDKKAWF
PKITEDFIASYQANYGFSGDGAPSSTGNVQDANTKTVEEPPQKEIPETTDSKKRGEKRKA
ESGWFHVEEDRNTNVYVSGLPPDITVDEFIQLMSKFGIIMRDPQTEEFKVKLYKDDQGNL
KGDGLCCYLKKESVELALKLLDEDEIRGYKLHVEVAQFQLKGEYDASKKKKKCKDYKKKL
SLQQKQLDWRPERRAGPNRLRHERVVILKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQ
IRKLLLFDRHPDGVASVSFREPEEADNCIQTLDGRWFGGRQITAQAWDGTTDYQVEETSR
EREERLRGWEAFLNAPEANRGLQRMDSICGSERPGPSRVRHFSEHPSMSNMGAQEATTGM
AFEETIDENKFEKAEDDGGESEGDASEKDAKEGESDGDYPERESDEGCSKRQCEEGCPDR
ESGEGCSKRESGEGCPERELELEEGNPKKESQENGPERESKKKGKENYEKNGLAKESEDN
DLNRESEGEDSPKKESEEDDSERESEEDSSEKQSENGSDKELEENGVKKDFDQDASDKEF
PENVEKESEENETDKSEFDEGSERVLGEEGSEREFEEDSDEKEEEEDDDEEKEVVYERVF
EDDSDDFEEEEEAYEKECEDADEKEEDDDVDEKVFDDSDEKEDEEDTDVRKDDDASDKVF
EDNSNEKLFNEEEGPNEKLFDDSDERGTVGNVKEDGSQSTDSSFALSSSDDDGDEV
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgagtggcagcaacttgagcgggaacgatgaatttgatgagcagttgcgaatgcaagaa
ttgtacggagaccccaaggaaggtgacacccagaatgagccctctggagaaactgattct
ttgggacaaccaccagatgacactccctacgagtgggaccttgataagaaggcttggttc
cctaagatcaccgaagatttcattgcttcgtatcaggccaactacggcttttctggtgat
ggtgcacccagctctactgggaatgtccaggacgccaacactaagactgtagaagagccg
ccacagaaagaaatcccggaaaccactgactccaaaaagaggggagaaaagagaaaggct
gaatctggatggttccatgttgaagaagacagaaatacaaatgtatatgtgtcaggtctc
cctccagacatcacagtggatgaatttatacagcttatgtccaaatttggtattattatg
agggatcctcagactgaagaatttaaggtcaaactttacaaagatgatcaaggaaatctt
aaaggagatggactttgctgttatctaaagaaagaatctgtggaacttgcattaaaactt
ttggatgaagatgaaattagaggctacaaattgcatgtggaggtggcacagttccagctg
aagggggaatacgatgcctcaaagaagaagaagaagtgcaaagactataagaagaagctg
tctctgcagcagaagcagttggattggagacctgagagacgagctgggccaaaccggctg
cgccatgaacgagttgtcattctcaaaaatatgtttcaccccatggattttgaggatgat
ccattggtgctgaatgaaatcagagaggatcttcgagtagaatgttcaaagtttgggcag
attaggaagctccttctgtttgatagacacccagatggtgtggcctctgtgtccttcaga
gaaccagaggaggctgataattgtattcagactctggatggaaggtggtttggtggccgt
cagatcactgctcaagcctgggatgggactacagattatcaggtggaggagacctcaaga
gaaagagaggaaaggctaagaggctgggaggcattcctcaatgctcctgaggccaacaga
ggccttcagcgtatggattccatctgcggttcagaaaggccagggccttccagagtgagg
catttttcagagcacccaagtatgtctaacatgggtgctcaggaagctacgactggaatg
gcgtttgaagaaactatcgatgaaaataagtttgaaaaggcagaagatgatgggggagag
tctgaaggagatgcttctgaaaaagatgctaaagaaggtgagtccgatggagactaccct
gagagagagagtgatgaaggctgctccaagagacagtgtgaagagggctgccctgataga
gagagtggagaaggctgctccaagagagagagtggagaaggctgtcctgagagggagctt
gagctagaagagggtaatcctaaaaaggagtctcaggagaatggccctgaaagagaatct
aagaagaaaggtaaagagaattatgaaaagaatggccttgcaaaagaatctgaagacaat
gacctcaacagagagtccgaaggggaagatagccccaagaaagaatcagaagaggatgac
tcagagagggaatctgaggaagacagctcagaaaagcaatctgaaaatggctctgacaaa
gaactagaagaaaatggtgtgaaaaaagattttgaccaggatgcctctgacaaggagttc
ccagaaaatgttgagaaagagtcagaagaaaatgagactgacaagtcagaatttgatgaa
ggctctgaaagagtgttaggtgaggaaggctctgagagagaatttgaggaagactcagat
gaaaaggaggaggaggaagatgatgatgaagagaaagaggtcgtatatgaaagagttttt
gaggatgattctgatgacttcgaggaggaagaagaagcatatgaaaaggagtgtgaagat
gctgatgagaaagaggaagacgatgatgttgatgaaaaggtctttgatgactcggatgag
aaggaggatgaagaagacacagatgtaaggaaagatgacgatgctagtgacaaggtattc
gaagacaattccaatgagaagttgtttaatgaggaagaaggtcccaatgagaagttgttt
gatgattctgatgaaagagggactgtggggaatgtgaaggaagatgggtctcaatccaca
gacagcagctttgccctcagtagtagtgatgatgatggtgatgaagtgtaa

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