KEGG   Rattus norvegicus (rat): 319113
Entry
319113            CDS       T01003                                 
Symbol
Yrdc
Name
(RefSeq) threonylcarbamoyl-AMP synthase precursor
  KO
K07566  L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    319113 (Yrdc)
   03016 Transfer RNA biogenesis [BR:rno03016]
    319113 (Yrdc)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.87  L-threonylcarbamoyladenylate synthase
     319113 (Yrdc)
Ribosome biogenesis [BR:rno03009]
 Prokaryotic type
  Other maturation factors
   319113 (Yrdc)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    319113 (Yrdc)
 Prokaryotic type
    319113 (Yrdc)
SSDB
Motif
Pfam: Sua5_yciO_yrdC
Other DBs
NCBI-GeneID: 319113
NCBI-ProteinID: NP_783194
RGD: 708492
Ensembl: ENSRNOG00000025424
UniProt: Q499R4
Position
5:142394833..142399798
AA seq 280 aa
MSTARPCAGLRAAVAAGMGLSDGPAGSSRGCRLLRPPAPAPALPGARLLRLPESEAVEAA
SPERSGWTEALRAAVAELRAGAVVAVPTDTLYGLACSASCSAALSCVYRLKGRSEAKPLA
VCLGRVADVYRYCQVRVPRELLEDLFPGPVTLVMERSEELNKDLNPFTPLVGIRIPDHAF
MLDLAQMFGGPLALTSANLSSQASSLSVEEFQDLWPHLSLVIDGGPIGDSESPECRLGST
VVDLSVPGKFGIIRSGCALENTTAILQGKYGLLPSQGSCS
NT seq 843 nt   +upstreamnt  +downstreamnt
atgtctactgcgcgtccgtgtgcggggctgagggccgctgtggcggccggcatggggctg
agcgatgggccagcgggctctagccgcggctgccgccttctacgccctcccgcgcccgct
ccggcgcttccaggggcccggctgctgcggcttccggagagcgaggccgtggaggccgca
agccccgagcgctccggttggaccgaggcgctgcgggccgccgtggccgagctgcgcgct
ggcgccgtggtggcggtcccaactgacacgctgtacggtctggcctgttcggcgagctgc
tcggcggctctgagctgtgtgtatcgcctcaagggccgcagtgaggccaagccgctggcc
gtgtgcctgggccgcgtggccgacgtctacaggtactgtcaggtgagagtacctagggag
ctcctggaagacctgttcccaggacctgtgaccctggtgatggaacgctcagaggagctc
aacaaagacctcaacccctttactcctctcgttggcatccgaattcctgaccatgccttt
atgctggacttggcccaaatgtttgggggaccacttgcactcacgagtgccaacctcagc
tcccaggccagttctctgagtgttgaggagttccaagacctctggcctcatttgtccctt
gtcattgatggggggccaattggggatagtgaaagccctgagtgtcgtcttggctctact
gtggttgacttgtctgtgcctggaaagtttggcattattcgctcaggctgtgccctggaa
aatactacagccatcctccaggggaaatatgggctgctcccttcacaggggtcctgttca
tga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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