KEGG   Rattus norvegicus (rat): 353231
Entry
353231            CDS       T01003                                 
Symbol
Spg7
Name
(RefSeq) paraplegin isoform 1
  KO
K09552  spastic paraplegia 7 [EC:3.4.24.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    353231 (Spg7)
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rno03110]
    353231 (Spg7)
Peptidases and inhibitors [BR:rno01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   353231 (Spg7)
Chaperones and folding catalysts [BR:rno03110]
 Other chaperones and cochaperones
  AAA proteases
   353231 (Spg7)
SSDB
Motif
Pfam: Peptidase_M41 AAA FtsH_ext AAA_5 nSTAND3 AAA_17 RuvB_N AAA_22 AAA_16 AAA_2 NACHT Mg_chelatase TIP49 IstB_IS21 AAA_28 ABC_tran AAA_14 PglZ RNA_helicase
Other DBs
NCBI-GeneID: 353231
NCBI-ProteinID: NP_852053
RGD: 727940
Ensembl: ENSRNOG00000015150
UniProt: Q7TT47 A0A2H2GPM9 A6IZU9
Position
19:68025619..68059754
AA seq 744 aa
MAAALLLLRALRQSPEPGPWRLWAQLSGRSPGLFSGAGGRRPYVVRGTPIGLAAAGGHTP
QSLLLRILTPSFEGVSGLLLKRHIVPSAIRLWQLSGSTLYFNTSGLKQKNKDDDKPKGKA
PEDDEEERRRKEREDQMYRERLRTLFIIAIVMSLLNSLSTSGGSISWADFVNEMLAKGEV
QRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIESKDR
IPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDG
KTGKGVSFQDVAGMHEAKLEVREFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAK
AVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTS
MSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLP
TLQERREIFEQHLKGLKLTQPSSFYSQRLAELTPGFSGTAKKSKILSKEEQRVVAFHESG
HALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLFERMCMALGGRAAEA
ISFSRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPVSFPEAQEGLVGIGRRPFSQGLQQ
MMDHEARLLVARAYRHTEKVLLDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKM
IAPQKWIDAEKEKQASGEEEAPAP
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcggccgcgttgctgctgcttcgcgcgctccgccagagcccggagcccgggccctgg
cggctgtgggcccagctctcaggcaggagccccggcctcttctccggggccggcggtagg
cggccgtacgtagtccgtgggactccgattggcctggctgcggctggaggccacacgcct
cagagcttgctattgcgaatactgacccctagctttgaaggtgttagcggattgttactg
aaacggcatatagttccaagtgcaatcagactgtggcagctttcaggtagtactttgtat
tttaacacctcagggttgaagcagaagaacaaagatgatgataaacccaaaggcaaagcc
ccggaagatgacgaagaagagaggaggcggaaggagcgggaagaccagatgtaccgggag
aggctgcgcaccttgttcatcatcgccatcgtgatgagcctgctcaactccctcagcaca
agtggcggcagcatctcctgggctgacttcgtcaacgagatgctggctaaaggcgaggtg
cagcgtgtgcaggtggtgcccgagagtgatgtggtggaagtctacctgcatccaggagct
gtggtgtttgggcggcctcggctggccttgatgtaccggatgcaggttgcaaacatcgac
aaatttgaagagaagcttcgagctgctgaagatgaactgaacatcgagagcaaggacagg
attcccgtgtcctacaagcggacaggattctttggaaatgccctctatgccctggggatg
actgcagtgggcttggccatcctgtggtatgttttcagactggctgggatgaccggaagg
gaaggcggattcagtgcctttaatcagcttaaaatggcgcgcttcaccatcgtggacggg
aagacggggaaaggagtcagcttccaggatgtggcgggaatgcacgaagccaagctggaa
gtccgagagtttgtggattatctgaagagcccggagcgtttccttcagctgggtgccaag
gttccaaagggtgccctgctgctgggaccccctggttgtgggaagacgctgttggccaag
gcagtggccacggaggctcaggtgccctttttagcaatggctggcccagagtttgtggag
gtcattggaggcctgggagccgcccgagtgcgcagcctcttcaaggaagcccgggccagg
gccccttgcattgtgtacattgatgagatcgatgctgtggggaagaagcgctccacctcc
atgtccgggttctccaacacagaagaggagcagaccctcaaccagctcctcgtagagatg
gacggaatgggcaccgcagaccacgtcatcgtcttggcatccaccaaccgagccgatgtc
ctggacaacgctctgatgaggcccggtcggctcgacaggcacgtcttcatcgatcttccc
actctccaggagaggcgggagattttcgagcagcacctgaaaggcctcaagttgacccag
cccagcagtttttactcccagcggctggcagagctgactcctggattcagtggaactgct
aaaaagagtaagatcctttccaaggaggagcagagagtggttgctttccatgagtctggc
catgccctggtcggttggctgctggaacacacggaggctgtgatgaaggtctccatagca
cctcggacaaacgctgctctgggcttctctcagatgctccctcgggaccagtacctcttc
accaaggagcagctgtttgagcggatgtgcatggccctaggcggccgtgcagctgaagcc
atctcattcagcagggtcacctctggggcccaggatgatttgaggaaggttacccgtatc
gcctactccatggtgaaacagtttgggatggctcctagcattgggcccgtatccttccct
gaggcacaagagggcctcgtgggcattggacgccgtcccttcagccagggtctccagcag
atgatggaccatgaagcaagactgctggtggccagagcctacagacacactgagaaggtg
ctgctggacaacctggacaagctgcaggcgctggcgaatgcccttctggaaaaggaagtg
ataaactatgaggacattgaggcgctcattggcccgccgccccatgggccaaagaaaatg
attgcaccacagaaatggattgatgctgaaaaggagaaacaagcctcaggggaggaggag
gctccggctccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (19)   
   Pfam (19)   
All databases (47)   

Download RDF
DBGET integrated database retrieval system