KEGG   Rattus norvegicus (rat): 360464
Entry
360464            CDS       T01003                                 
Symbol
Parn
Name
(RefSeq) poly(A)-specific ribonuclease PARN
  KO
K01148  poly(A)-specific ribonuclease [EC:3.1.13.4]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    360464 (Parn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    360464 (Parn)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     360464 (Parn)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     360464 (Parn)
SSDB
Motif
Pfam: CAF1 RNA_bind R3H NCBP3 RRM_1
Other DBs
NCBI-GeneID: 360464
NCBI-ProteinID: NP_001257344
RGD: 1565449
Ensembl: ENSRNOG00000002912
UniProt: A0A0G2QC45
Position
10:complement(1917830..2055749)
AA seq 624 aa
MEIIRSNFKINLPKVYQAIEEADFFAIDGEFSGISDGPSVTALTSGFDTPEERYQKLKKH
SMDFLLFQFGLCAFKYDHANSKHVTKSFNFYVFPKPFSRSSPDVKFVCQSSSIDFLASQG
FDFNKVFCSGIPYLNQEEERQLREQFDEKRSQANGAGALTKCPVTIPEDQKKFIDQVIEK
IEGFLQREEKRTLELNPCTGFQRKLIYQTLSWKYPKGIHVETLETDKKERHIVISKVDEE
ERKRREQEKYAKEQEELNDAVGFSRVIHAIANSGKLVVGHNMLLDVMHTIHQFYCPLPVD
LNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFDPPKVESAEGFP
SYDTASEQLHEAGYDAYITGLCFISMANYLGSLLSPPKTCVSARSKLIEPFFNKLFLMRV
MDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQ
PEQVQIAVNTSKYAESYRIQTYAEYVGKKQESKQVKRKWTEDSWKEVDRKRPHVPGPCYH
TNSFTAAGIVGKRTLSPDPREAGVVDRESEGISDPELEQTDYCADPLPEGRKKAKKLKRM
KKEFSLAGSASDSPAVLFEVPDTW
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggagataatccggagcaattttaagattaatcttcccaaagtgtaccaggccatagag
gaggctgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccctcagta
acagcattaacaagtggttttgacaccccagaagagagatatcagaagcttaaaaagcat
tccatggacttcttgctgtttcagtttggcctctgtgcttttaagtatgaccacgccaat
tccaagcatgtaacgaagtcgtttaacttctatgttttccccaagcctttcagtaggtcc
tcaccagatgtcaagtttgtttgccagagctccagcattgactttctggcaagccaagga
tttgactttaataaagtgttttgcagtggaattccatatctgaaccaggaagaagaaaga
cagctgagagagcaatttgatgaaaaacgttctcaggccaatggggccggagctctgaca
aaatgtcctgtgacaattcctgaggatcagaagaagtttattgaccaagtaatagagaag
atagagggtttcctacagagagaagagaagaggactctggaacttaacccatgcactggg
ttccaaagaaaacttatttatcagactttgagttggaagtatcccaaaggcattcatgtt
gagacattagagactgacaagaaggaaagacacatagttatcagcaaagtggatgaagaa
gaacgcaaaaggagagaacaggagaagtacgcaaaggagcaggaggaactgaatgatgct
gtaggattttcaagagtcatccatgcgattgctaattcggggaagctggttgttggacac
aacatgctcttggatgtcatgcacactattcaccagttctactgccctctgcctgtggac
ctgaatgagtttaaggagatgacaacatgtgtcttccccagactcttggatactaaattg
atggccagcacccagccctttaaggatatcattaacaatacatcccttgcagagttggaa
aagcggttgaaagagacaccttttgaccctcctaaagttgagagtgcggaaggctttcca
agctacgacacagcttctgagcagctgcatgaggcaggttatgatgcgtacatcacagga
ctctgcttcatctccatggcaaattacttaggttctttactcagtcctccaaaaacgtgt
gtgtccgccagatcaaagctcatcgaacccttttttaacaagttatttcttatgagggtc
atggatattccctatttaaacttggaagggccagacttgcagcctaagcgggatcatgtt
ctccatgtgaccttccctaaagaatggaaaaccagtgacctgtaccagctcttcagcgcc
tttggtaacattcagatatcctggattgatgacacatcagccttcgtttctctcagccaa
ccagaacaagtacaaattgctgttaataccagtaagtatgctgaaagttatcggatccag
acctacgctgagtatgtgggaaagaagcaggaaagcaagcaggtcaagaggaagtggaca
gaagacagttggaaggaggtggacagaaagcggccccacgtgccgggcccctgttaccac
accaacagcttcactgcagccggcatagttggaaagagaactctgagtcccgaccctcgg
gaagctggagtggtggacagagaatcagagggaatatctgacccggaacttgaacagacg
gattactgtgcagaccccctcccagagggaaggaaaaaggccaagaagttaaaaagaatg
aagaaagagttttccttggcaggaagtgcctcagatagccctgctgtgctttttgaagtc
cccgacacgtggtaa

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