KEGG   Rattus norvegicus (rat): 360491
Entry
360491            CDS       T01003                                 
Symbol
Traf7
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7 isoform 2
  KO
K10646  E3 ubiquitin-protein ligase TRAF7 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    360491 (Traf7)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     360491 (Traf7)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    360491 (Traf7)
SSDB
Motif
Pfam: WD40 NBCH_WD40 WD40_like zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-TRAF zf-C3HC4_4 Sina_ZnF zf-C3HC4_3 zf-RING_5 PKcGMP_CC DUF4164 Nup160 Filament U-box DUF16 HrpB7 Crescentin KxDL
Other DBs
NCBI-GeneID: 360491
NCBI-ProteinID: NP_001121020
RGD: 1559653
Ensembl: ENSRNOG00000003131
UniProt: B1WBW7
Position
10:complement(14038117..14056832)
AA seq 669 aa
MSSAKSARYNRFSGGPANLPASDSSGTRMETTFGPTFSTVTTITKADGTSTYKQHRRTPS
SSSTLAYSPRDEEDGMPPINTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVF
AEQPSVKLCCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQI
GELFIHCRHGCRAAGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCPP
LLKMNLEAHLKECEHIKCPHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEM
HVALAQKDQEIAFLRSMLGKLSEKIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASML
NDELSHINARLNMGILGSYDPQQIFKCKGTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIK
VWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYSGSADCTIIVWDIQNLQKVNTIRAHDNP
VCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGLNHWVRALVAAQSYLYSGSYQTI
KIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVWDIESKEQVRTLTGHVGT
VYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTALAVSRGRLFSGAV
DSTVKVWTC
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgagctcagccaagagtgcccgctacaaccgcttctccggggggcctgccaaccttcct
gcctcagacagcagtgggaccaggatggaaacaacctttgggcctaccttttcgaccgtc
accaccattaccaaagctgatgggaccagcacatacaaacagcatcgcaggacgccttcc
tcctctagcacccttgcctattcgccacgggatgaggaggacggcatgccccccatcaac
actcctcgccgctctgactcagccatctctgtccgctccctgcactccgagtccagcatg
tccctgcgctccacgttctcgctgcctgaggaggaagaggagccggagccattggtgttt
gcggagcagccctcggtgaagctgtgctgccagctctgctgcagtgtgttcaaggaccct
gtgatcactacgtgtgggcacaccttctgcagacgatgcgccttgaagtcagagaagtgt
cctgtggacaatgccaagctgacagtggtggtaaacaacattgcagtagctgagcagatt
ggagagctcttcatacattgtcggcatggctgccgtgcagcaggcactgggaagcccggt
gtctttgaggtagacccaaggggctgccccttcaccatcaagcttagtgcccggaaggac
cacgagagtagttgtgactacaggcctgtgcgctgccccaacaaccccagctgcccaccc
cttctcaagatgaacctcgaggcccacctgaaagaatgcgagcacatcaagtgtccccac
tctaagtacgggtgcacatttattgggaatcaggacacctatgagacgcacttagaaaca
tgtcgctttgagggcctgaaggaattcctgcagcagaccgatgaccgcttccacgagatg
catgtggcactggcccagaaggaccaggagattgcctttctgcgttccatgctgggcaaa
ctctcagagaagattgaccagctggagaaaagccttgagctcaagttcgatgtcctcgat
gagaaccagagcaagctcagtgaggacctcatggaattccggagggatgcatccatgttg
aatgatgagctgtctcatatcaatgcacgcctgaacatgggtatcctgggatcctatgat
cctcagcagatcttcaagtgcaaagggaccttcgtgggacaccagggccctgtctggtgt
ctctgtgtctactccatgggtgacctgctcttcagtggctcttctgacaagacgatcaag
gtgtgggacacgtgtaccacttacaagtgccaaaagacactggaaggtcatgacggtatt
gtgctggcgctctgtatccaggggtgcaaactgtacagtgggtctgcagactgcaccatc
attgtatgggacatccagaacctgcagaaggtgaacaccatccgggcccatgacaaccct
gtgtgcacactggtgtcttcccataacatgctcttcagtggctcccttaaagccatcaag
gtctgggacatcgtgggcactgagctaaagttgaagaaggaactcacaggcctcaaccac
tgggtgcgggccttggtggcagcacagagctatctgtacagtggctcttaccagacaatc
aagatctgggacattcggacccttgactgcatccatgtcctgcagacatctggtggcagt
gtgtattccattgctgtgacgaatcaccacattgtctgtggcacctatgagaacctcatt
catgtatgggacattgaatccaaagagcaggtgcggaccctaacgggccatgtgggcaca
gtatatgccctggcagtcatttcaacaccagaccagaccaaagtcttcagcgcatcctat
gaccgctccctcagggtctggagcatggacaacatgatctgcacacagacgctgctgcgc
catcagggcagtgtaactgcactggctgtctcccggggccggctcttctcgggggctgtg
gatagcaccgtgaaggtttggacatgctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (1)   
   RefSeq(pep) (15)   
DNA sequence (17)   
   RefSeq(nuc) (15)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (64)   

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