KEGG   Rattus norvegicus (rat): 360520
Entry
360520            CDS       T01003                                 
Symbol
Tbc1d9b
Name
(RefSeq) TBC1 domain family member 9B isoform 1
  KO
K19951  TBC1 domain family member 8/9
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    360520 (Tbc1d9b)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    360520 (Tbc1d9b)
 Endosome - Golgi transport
  Rab GTPases and associated proteins
    360520 (Tbc1d9b)
SSDB
Motif
Pfam: RabGAP-TBC GRAM EF-hand_1 EF-hand_7 EF-hand_6
Other DBs
NCBI-GeneID: 360520
NCBI-ProteinID: NP_001381172
RGD: 1310147
Ensembl: ENSRNOG00000003050
Position
10:34961012..34998227
AA seq 1263 aa
MWLGPEEVLVANALWVTERANPFFVLQRRRGHGKGGGLTGLLVGTLDVVLDSSARVAPYR
ILHQTQDSQVYWTVACGSSRKEITKHWEWLENNLLQTLSIFDNEEDITTFVKGKIHGIIA
EENKNLQPQGDEDPGKFKEAELKMRKQFGMPEGEKLVNYYSCSFWKGRVPRQGWLYLTVN
HLCFYSFLLGKEVSLVVQWVDVTRLEKNATLLFPESIRVDTRDQELFFSMFLNIGETFKL
MEQLANLAMRQLLDSEGFLEDKALPRPIRPHKNISALKRDLDARAKNECYRATFRLPKDE
RLDGHTGCTLWTPFNKLHIPGQMFISYNYICFASKEEDACRLIIPLREVTIVEKADSSSV
LPSPLSISTKSKMTFLFANLKDRDFLVQRISDFLQKTPSKQTGSIAGGTKASVPDPAPES
LPTPQEASEPPTSPTSPLSSPLSFSTQEIPTTSQGLLKVFQKNSPMEDLGAKGAKEKMKE
ESWNIHFFEYGRGVCMYRTAKTRELVLKGIPESLRGELWLLFSGAWNEMVTHPGYYAELV
EKSMGKYSLATEEIERDLHRSMPEHPAFQNELGIAALRRVLTAYAFRNPTIGYCQAMNIV
TSVLLLYGSEEEAFWLLVALCERMLPDYYNTRVVGALVDQGIFEELTRDVLPRLSEKMQE
LGVISSISLSWFLTLFLSVMPFESAVVIVDCFFYEGIKVILQVALAVLDANMEQLLDCSD
EGEAMTVLGRYLDNVVNKQSISPPIPHLHALLTSGDDPPAEVDIFDLLKVSYEKFSSLRA
DDIEQMRFKQRLKVIQSLEDTAKRSVVRAIPGDIGFSIEELEDLYMVFKAKHLASQYWGG
NRSAAIHRDPSLPYLEQYRIDASQFRELFASLTPWACGSHTPVLAGRMFRLLDQNKDSLI
NFKEFVTGMSGMYHGDLTEKLKALYKLHLPPALIPEEAESALEAAHYFPEDSSSEASPLA
SDLDLFLPWEAQAGLQEQQEGRGSEDIQERREEKETSPPDYRHYLRIWAKEKEAQKETIK
DLPKMNQEQFIELCKTLYNMFSEDPLEQDLYHAIATVASLLLRIGEVGKKFSALTTKKPR
DGAHSGDHNSATEEDEPPISKLHQDPARECQPPAAGDPQAKASGDMHLGKALQDSHVIVE
GGSGEGQGSPSLLLSDDETKDDMSMSSYSVVSTGSLPCEDLTEDTVLVGGEACSPTATSR
MGGTVDMDWCISFEQILASILTESVLVNFFEKRVDIGLKIKDQKKVERQFSTSSDHEPPG
VLG
NT seq 3792 nt   +upstreamnt  +downstreamnt
atgtggctcggcccggaggaggtgctggtggccaacgcgctatgggtgacggagcgggcc
aaccccttcttcgtgctgcagcggcgccgaggccatggcaagggtggcggcctcacgggt
cttcttgtgggcaccctggatgtggtgctggactccagtgcccgtgtggccccctaccgc
atcctgcaccagacccaggactcacaggtctactggacggtggcatgtggttcttcccgc
aaagagatcaccaaacactgggagtggctggaaaacaacttacttcagacgctgtccatc
ttcgacaacgaggaggacatcactaccttcgtcaagggcaagatacacggcatcatcgca
gaagagaacaagaacctgcagccccagggggacgaggacccagggaaattcaaggaggca
gagctaaagatgcggaagcagttcggcatgccagagggagagaagctggtcaactactac
tcctgtagcttctggaagggccgagtgcctcggcagggctggctctacctgaccgtcaac
cacctgtgtttctactccttcttgctggggaaggaagtgagcctggtggtacagtgggtg
gacgttacacgcttggagaagaatgccactttactcttccccgagagcatccgtgtggac
acgcgggaccaggagctattcttctccatgttcctaaacattggtgagaccttcaagctc
atggaacagctggccaacctggccatgcgacaactgctggacagcgagggcttcctggag
gacaaggccctgcccaggcctatccggccacataagaacatctcagctctaaagcgagac
ctggatgcccgagctaagaacgagtgctacagggccacgttccggctcccaaaagatgaa
cggctggatggacacacaggttgcaccctgtggacaccatttaacaagctacacatcccc
ggccagatgttcatctcctataactacatctgctttgccagcaaagaggaagatgcgtgc
cgcctcatcatacccctgagggaggtgaccattgttgagaaagctgacagctccagtgtc
ctgcccagccctctgtctatcagcactaagagtaaaatgaccttcttgtttgccaacctg
aaagaccgtgacttcctggttcagaggatctctgacttcctccagaaaacaccgtccaaa
cagacaggcagcatcgctgggggaacaaaggccagtgttccagacccagccccagagtct
ctcccaactcctcaggaggcatcagagccacccaccagcccaacctctcccctaagcagc
cctctgagtttcagtacacaggagattcctactacttcccagggcctgctcaaagtcttc
cagaagaactcacccatggaggacctcggcgccaaaggggccaaggagaagatgaaggaa
gagtcctggaacatccacttctttgagtacgggcgtggcgtgtgcatgtaccgaacagcc
aaaactcgggagctggtcctgaaaggcatccccgagagcctccgaggggagctttggctc
ctcttctcgggggcctggaatgagatggtgacccatcctggctactacgctgagctagta
gagaagtccatggggaagtacagcttggccaccgaagagatcgagcgggacctccatcgc
tccatgcctgagcaccctgccttccagaacgagctggggatcgctgcactccggcgggtg
ctgaccgcctacgccttccgaaacccgactattggctactgccaggcaatgaacatcgtg
acctcggtgctcctgctctatggcagtgaggaagaagccttctggctactggtggccctg
tgtgagcgcatgctgcccgactactacaataccagagtagtgggggccctcgtagaccaa
ggtatctttgaagagctcacaagagacgtcctgccccggctctcagagaagatgcaggag
ctgggggtgatctccagcatctcgctgtcctggttcctgaccctcttcctcagcgtcatg
ccctttgagagcgcagtggttattgttgactgctttttctacgagggcatcaaagtgata
ctgcaggtggccttggctgtgctggacgccaacatggaacagctgctggactgcagtgac
gagggcgaggccatgaccgtgctgggcaggtacctggacaatgtggtcaacaagcagagc
atttctccacctatcccacacctccatgctctgctgaccagtggagatgaccctcctgca
gaggtggacatctttgacctcctgaaagtgtcttatgagaagttcagcagcctgagggct
gacgacattgaacagatgcggtttaaacagaggctgaaggtgatccagtccttggaagac
acagccaagagaagcgtggtccgggccataccaggggacattggcttctccatcgaagag
ctggaggatctttacatggtgtttaaggccaagcatctggcaagccagtactggggtggt
aaccgctcagcagccatccaccgagaccccagcctgccctacctggagcagtaccggatc
gatgccagccagtttcgggagctctttgccagcctgacgccttgggcctgtggctctcac
acgcctgtcttggcaggccgcatgttccgcctcctggaccaaaacaaggactcactgatc
aacttcaaggagtttgtgacagggatgagtgggatgtaccatggagacctcacagagaag
ctcaaagcgctctacaagctgcacctgcccccagctctgatcccagaggaagcggagtca
gccctggaggccgcccattatttcccagaggatagctcctcagaagcatctcctctggcc
tcagatctggatcttttcctgccttgggaggctcaagcaggactgcaggagcagcaggaa
ggaagaggaagtgaggacatccaggaaaggagagaggagaaggagaccagcccccctgac
taccgacactaccttcgaatatgggctaaggagaaagaggctcagaaggaaaccatcaag
gaccttcccaagatgaaccaggagcaattcattgagctgtgtaaaacactttacaacatg
tttagcgaagaccctttggaacaggacttgtaccatgccatcgccactgtggccagcctt
ctcctccgcattggtgaggtggggaagaagttttcggccctgaccaccaagaagcccagg
gatggtgcccacagtggggatcacaacagtgccacagaagaggatgagccacccatatcc
aaactccatcaggacccagcacgggaatgccagccaccagctgcaggggatccgcaggcc
aaagccagtggcgacatgcatcttgggaaagcattgcaggacagtcacgtgatagtggag
ggaggcagcggcgaggggcagggctctccttccctgcttttgtctgatgatgaaaccaaa
gatgacatgtccatgtcctcctactcagtagtcagcacggggtccctgccgtgcgaggac
ctcacagaagacacagtgctggtgggaggagaagcctgcagccccactgccacctcacgg
atgggaggcaccgtggacatggattggtgcatttccttcgagcagatcctggcctccatc
ctgacagagtctgtgctagtgaacttctttgagaagagggtagacattggactcaagatc
aaagaccagaagaaagtcgaaaggcagttcagcacctccagtgaccatgagccccctggg
gtcttgggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (32)   

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