KEGG   Rattus norvegicus (rat): 360588
Entry
360588            CDS       T01003                                 
Symbol
Brip1
Name
(RefSeq) Fanconi anemia group J protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03440  Homologous recombination
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    360588 (Brip1)
   03460 Fanconi anemia pathway
    360588 (Brip1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    360588 (Brip1)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     360588 (Brip1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     360588 (Brip1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     360588 (Brip1)
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD DUF1866
Other DBs
NCBI-GeneID: 360588
NCBI-ProteinID: XP_006247125
RGD: 1307659
Ensembl: ENSRNOG00000059997
UniProt: A0A0G2K475
Position
10:complement(71402035..71528083)
AA seq 1166 aa
MSSVLSEYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSA
LAWQQSLTGKPVDEGLNKKPEAPSSCSCSCHSKNFTYSDTNLDTSPHFSSPSKPSSERNA
VSSPCRDSPERNSLAAKLSAKKHASIHEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHH
LDARLASEKRVKPESPIRKTSSSFQNPDGLCSRCCCSANQGINKESANTVKKDNGDQSKR
PKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMELLD
GKHGKSCYFYHGVHRISNQQTLQFLHGISKAWDIEELVSLGRKLKACPYYTARELIDSAD
IIFCPYNYLLDSQIRESMDIKLKEQVVILDEAHNIEECARETASYSVTEVQLRFARDELD
SLINSNIRKKSHEPLRDVCYNLINWLETNSKNLVERDYESSCKIWSGNEMLLNLHRMGIT
AASFPVLQKHLSAVLQKEEKVTSTHGKEEAIQIPIISASTQIMLKGLFMVLDYLFRKNSR
FADDYKVAIQQTYSWTNQIAIFDKNALLPVPKNKKHSRQKIGVNVLNFWCLNPAVAFSDI
NDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWVGTVGSGPKGRNLCAT
FQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTV
IAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKVSEGLDFSDDNARAVITIG
IPFPNVKDLQVELKRQYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGALI
LVDDRFNNNPDRYISGLSKWVRQQIQHHSTFASALESLTEFSKRHQKVTNRSKKEEKCTK
ENGSTLDVACLEGSTLTSVSEASHQTPENSLEEEAKVCVQEQRYPQMAAENPSGPSHGVS
RRKESDPGLREKSVQTMKTEKSEISRSSSPTFGKQTEPVNWPIFNSLKRHFNSKVKNRTP
VLKSSKNHASASSAFNKTALPLTGKCVSSSAPANTPLAPCPQSEVIIPSVKADTTPAKTH
CKQNEKDPSPDAELSPVTEEAKGSSSNPAVGTEVDDDSVCFTPELFDPVSTDEENSELVE
TDRSSNNSDCLSAEELFETVTGFGQK
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgtcctcagtgttgtctgagtacaccattggtggggtgaagattcactttccctgtaga
gcttatccagcgcagcttgctatgatgaattctattgtcagagggctaaacagtagccaa
cattgtttgttggagagtcccacaggaagtggaaaaagtttagccttactttgttctgca
ttagcatggcaacagtctcttactgggaagccagtggatgagggcctgaataaaaagcct
gaagcaccatcttcgtgttcttgttcatgccattcaaagaattttacctacagtgacaca
aacctggacacttcacctcatttcagtagtccaagcaaaccatcttcggaaagaaatgca
gtctcatcgccctgtcgagactctcctgaaagaaatagtctggctgcaaagttatctgcc
aagaaacatgcgtccatacacgaggatgacgattttcaggtagagaagaaaagaatccga
cccttagaaacgacacagcagataagaaagcgtcactgtttggaaaaggatgtccaccat
ttagatgcacgactagcttcggaaaagagagtaaagcccgagtctccgatacgaaagacc
agctcctctttccaaaatcctgatggcctttgttccagatgctgttgctctgctaaccaa
ggaattaacaaagagtctgcaaacactgttaagaaagataatggggaccaatccaagaga
cctaaaatttactttgggacacgaacacacaagcagattgctcagattactagagagctc
cgtaaaacagcttactcaggggtcccgatgactattctttccagtagggaccatacctgt
gttcatcctgaagtagttggaaacttcaacagaaacgaaaagtgcatggaattgctggat
ggaaaacatgggaagtcctgctatttctatcatggcgttcacagaattagtaatcagcag
acattgcagtttcttcacggcatatccaaagcctgggacatagaagaacttgtcagcctc
gggaggaaactgaaagcttgtccctactatacagctcgagaactgatagacagtgccgac
ataattttttgcccctacaactacctcttagactcacaaataagggaaagtatggatata
aagctgaaagaacaagttgtcattttggatgaagctcataacattgaagagtgcgctcgg
gaaacagcaagctacagtgtaacggaagttcagctccggtttgctcgggatgagctagat
agtttgatcaacagtaatataaggaagaaaagccacgagcccctacgtgatgtgtgctat
aacctcatcaattggttagaaacaaattctaagaatcttgtagaaagggattatgagtcg
tcttgtaagatatggagtggaaatgagatgctcttaaacttacacaggatgggcatcacc
gctgcttctttccccgtcttgcagaaacatctctcagctgttcttcaaaaagaagaaaaa
gtcacatcaacccatggtaaagaggaggcaatacaaatacctattattagtgcatcaact
cagatcatgctcaaaggactcttcatggtacttgactatctcttcagaaaaaatagcaga
tttgcagatgattataaagttgctattcaacagacttactcctggacaaatcaaattgct
atttttgataaaaatgcgctcttgcctgtaccaaaaaataagaaacattcacgacagaaa
attggagttaatgtgctaaacttttggtgcttaaatccagctgtggccttttcagatatt
aatgacaaagtacggaccattgttctaacatcagggacgctgtcacccctgaaatccttt
tcatcggagcttggtgttacatttaacattcaactggaggccaaccatgtcatcagtaac
tcacaggtttgggttggtactgttggctcaggccctaagggtcggaacctctgtgctacc
ttccagcacactgaaacatttgagttccaggatgaagtgggaatgcttctgttgtctgtg
tgccagactgtgagccaaggaattttgtgctttttgccatcttacaagctattagagaaa
ttaagagaacgctggattttcacaggcttgtggcatagtttggagtcagtgaagacggtc
atcgcagaaccccaaggaggagaaaaaactgattttgatgaattgctacaggtgtactat
gatgctatcaagttcaaaggagaaaaggatggagcccttctcatagcagtttgtcgtggc
aaagtgagcgagggtctggatttctcagatgataatgcccgtgccgtcataaccatagga
attccttttccaaatgtgaaggatcttcaggttgaactaaaacgacagtacaacgaccac
cactcaaaattgagaggtcttttgcctggccgtcaatggtatgaaattcaagcatacaga
gccttaaatcaggctctaggcagatgtattcgacacaaaaatgactggggagctcttatt
ctagtggacgatcgcttcaataacaacccagaccgctatatatcgggactttctaaatgg
gtgaggcagcagatccagcaccactcaacctttgcaagtgccctggagtccctgaccgag
ttctccaaaagacaccagaaggttactaatagatccaaaaaggaggagaaatgtacaaaa
gaaaatgggtccactctggacgtggcctgtttggagggtagcactcttacaagtgtgtca
gaagcaagtcatcagacgccagaaaactctctggaagaagaagcaaaagtgtgtgtccag
gagcaacggtatccccagatggctgctgaaaacccctcaggaccaagtcatggcgtttcc
agaaggaaggaaagtgatccaggactaagagaaaaatctgttcagacaatgaaaacagaa
aaaagtgagatttcccggtcttcaagcccaacttttggaaagcaaacagagccagtcaac
tggcctatctttaattctctgaaacggcatttcaatagtaaagtaaaaaatcgcacaccc
gtgctcaagtcatcaaagaaccacgcctctgcttcttccgccttcaataaaactgccttg
ccactcacaggtaagtgtgtgtcctcaagtgcaccagcaaacacaccactagcaccttgc
cctcagtcagaagtcataattccatcagtgaaggctgacactactcctgctaagacccat
tgcaaacagaatgagaaagacccttccccggatgctgagctgtccccagtaactgaagag
gccaagggttccagttccaatccagctgttggaacagaagtagacgacgactctgtatgc
tttacacctgaactctttgatcctgtcagtacggatgaagaaaacagtgaactagttgaa
actgatagatccagtaataattcagattgtctttctgctgaagagctttttgaaactgta
actggatttgggcagaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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