KEGG   Rattus norvegicus (rat): 360595
Entry
360595            CDS       T01003                                 
Symbol
Rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1
  KO
K22379  E3 ubiquitin-protein ligase RNFT1 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    360595 (Rnft1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     360595 (Rnft1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    360595 (Rnft1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-rbx1 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 zf-RING_6 zf-Nse UBZ_FAAP20 zinc-ribbons_6 PHF5
Other DBs
NCBI-GeneID: 360595
NCBI-ProteinID: NP_001385733
RGD: 1562411
Ensembl: ENSRNOG00000003805
Position
10:71807403..71821132
AA seq 397 aa
MQTSCNQLHDPPGSAHDEGAAASQCVHPSRSTEGSLHPGDVHIQINSGPKEYSESPSSRN
TRSGVCTCAHGCVHSRFRSYSHSEARPPDDFATESGEHGSGSFSEFRYLFKWLQKSLPYI
LILGIKLVMQHITGISLGIGLLTTFMYANKSIVNQVFLRERSSKLRCAWLLVFLAGSSVL
LYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWIVGITDFILKFFFMGLKCLVLLVPSFIVP
FKSKGYWYMLLEELCQYYRIFVPIPVWFRYLISYGEFGNVTTWSLGILLALLYLILKLLD
FFGHLRTFRQVLRIFFTRPSYGVPASKRQCSDMDGICPICQAEFQKPVLLFCQHIFCEEC
ITLWFNREKTCPLCRTVISERINKWKDGATSSHLQMY
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgcagaccagctgtaaccaactccatgatcctccaggcagtgcacatgatgagggcgct
gcagcctcccagtgtgttcacccatcaaggtcgacagaaggttctcttcaccctggagac
gtacacatccaaataaactcaggacctaaagaatactctgaaagtccaagctctagaaac
acacggtcgggtgtctgtacctgtgcccatggatgtgtgcatagtcgtttccggagttac
tcccacagtgaagcaaggccacctgatgattttgccacagagtctggggaacatggaagt
ggctccttctcagaattccgatatctcttcaagtggttgcaaaaaagtcttccttatatt
ttgattttaggcattaaacttgttatgcagcatataacaggaatttctcttggaattggg
ctgctaacaacttttatgtatgcaaacaaaagcattgtaaatcaggtttttctaagagaa
cggtcatcaaagcttcggtgtgcttggctattggtgttcctggcaggttcttccgtcctc
ttatattacaccttccattctcagtcgcttcattacagcttgattttcttaaatcctaca
ctcgaacagttgagcttctgggaagttctttggatcgttgggattacagacttcattcta
aaattctttttcatgggtttaaaatgcttggttttgctggtgccttctttcatcgtgcct
ttcaaatcaaagggatattggtacatgcttttagaagaattgtgtcagtattaccgaatt
tttgttcccataccagtttggtttcggtaccttataagctatggggagtttggtaatgta
actacatggagtcttgggatattgctagctttactctacctcatactaaaacttttggac
ttttttggacatttgagaactttcagacaggtcttacgaatattttttacacgaccaagt
tatggagtgcctgccagcaagagacagtgttcggatatggatggtatttgtccaatatgt
caagctgaatttcagaagccagttcttctcttttgtcagcatatattctgtgaagaatgt
attaccttatggtttaacagagagaaaacatgtcccctgtgcagaactgtgatttcagaa
cgtataaacaaatggaaagatggggccacttcatctcaccttcagatgtactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (15)   
   Pfam (15)   
All databases (37)   

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