KEGG   Rattus norvegicus (rat): 360768
Entry
360768            CDS       T01003                                 
Symbol
Ccz1
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform 1
  KO
K27045  vacuolar fusion protein CCZ1, animal type
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04137  Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    360768 (Ccz1)
SSDB
Motif
Pfam: Intu_longin_1 Intu_longin_3 Intu_longin_2
Other DBs
NCBI-GeneID: 360768
NCBI-ProteinID: NP_001381209
RGD: 1306410
Ensembl: ENSRNOG00000001032
Vega: OTTRNOG00000001895
Position
12:15714768..15738273
AA seq 480 aa
MAAAAAGTGTWAAQEKQFPPALLSFFIYNPRFGPREGEEENKILFYHPNEVEKNEKIRNV
GLCEAIVQFTRTFSPSKPAKSLHTQKNRQFFNEPEENFWMVMVVRNPIIEKQSKDGKAVV
EYQEEELLDKVYSSVLQQCYSMYKLFNGTFLKAMEDGGVKLLKERLEKFFHRYLQTLHLQ
SCDLLDIFGGISFFPLDKMTYLKIQSFINRMEESLSVVKYTAFLYNDQLIWSGLEQDDMR
ILYKYLTTSLFPRHIEPELAGRDSPVRAEMPGNLQHYGRFLTGPLNLNDPEAKCRFPKIF
VNTDDTYEELHLIVYKAMSAAVCFMIDASTQLTLDFCRRLDSIVGPQLTVLASDICEQFN
INKRISGSEKEPQFKFIYFNHMNLAEKSTIHMRKTPSVSLTSVHPDLMKILGDINSDFTR
ADEDEEIIVKAMSDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKKLCATQFNNIFFLD
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggcggcagcggcggccgggacagggacttgggcagcccaggaaaagcagttcccgccg
gcgctgttgagcttcttcatctacaacccacgtttcgggccgcgagagggagaggaagaa
aataaaattttgttttaccatccaaatgaagtagaaaagaatgaaaaaattagaaatgtt
ggattatgtgaagcaatcgtacagtttacaaggacttttagcccatcgaaacctgcaaaa
tctttacacacacagaagaatagacagttcttcaatgaaccagaagaaaatttctggatg
gtcatggttgttcggaatcctatcatcgaaaagcagagtaaagatggcaaggcggtagtg
gagtaccaagaggaggaactgttggacaaggtgtatagctcagtgctccagcagtgctac
agcatgtacaagctttttaatgggacgtttctgaaagccatggaagatggaggtgtcaag
ctcctaaaagagagattagagaaattcttccatcggtatttgcagacgctgcatttgcaa
tcatgtgacctcctggatatctttggtgggatcagcttcttcccgttggataaaatgact
tacttgaaaatccagtcctttattaaccgaatggaagaaagcctgagtgtagtcaaatac
acagcattcctgtacaacgaccaactcatctggagtggactagaacaagatgacatgaga
attttgtacaaatacctcaccacctcactgttccccagacacatcgaacctgagttggcg
ggaagggattccccagtaagggcggaaatgccgggaaatcttcaacactacggaagattt
cttactggacccttgaaccttaatgatccagaagcaaaatgcagattccccaaaattttt
gtaaatacagatgacacttatgaagagctccatttaattgtttataaggccatgagcgca
gctgtctgcttcatgatcgacgcctccacgcagctcacgctggatttctgccgaagattg
gacagcattgtcgggccgcagctcacagtgctggcatctgacatctgtgagcagtttaat
atcaacaagagaatctctgggtctgaaaaagagccccagtttaagttcatctacttcaac
cacatgaatttagcagagaaaagtacaattcacatgaggaagacgcccagcgtgtcactc
acgtccgtccacccggatctaatgaagattctaggggacatcaacagtgactttaccaga
gcagatgaagatgaagagatcattgtgaaagccatgagcgactactgggttgtggggaag
aagtctgaccagcgggagctctacgtgattctcaatcagaagaacgcgaacctgatcgag
gtcaatgaagaggtgaagaaactctgcgccacgcagttcaacaacatcttcttcttggat
tga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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