KEGG   Rattus norvegicus (rat): 360860
Entry
360860            CDS       T01003                                 
Symbol
Cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04115  p53 signaling pathway
rno04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    360860 (Cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    360860 (Cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    360860 (Cop1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     360860 (Cop1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    360860 (Cop1)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     360860 (Cop1)
SSDB
Motif
Pfam: WD40 WD40_like
Other DBs
NCBI-GeneID: 360860
NCBI-ProteinID: NP_001020297
RGD: 1304773
Vega: OTTRNOG00000000163
UniProt: Q5BJY0
Position
13:73954058..74095283
AA seq 433 aa
MSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGPSQTKKQPWYNSTLASRRK
RLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLY
NGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISW
SSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKV
KLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGH
RKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACG
SENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIA
ANSQGTIKVLELV
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagtggcttgtactcccccgtcagtgaagatagcacggtgcctcaatttgaagctcct
tctccatcgcacagtagcattattgactctacagaatacagccaacctccaggcttcagt
gggccgtctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaag
cgactcactgctcattttgaagacttagagcagtgttatttttctacaaggatgtctcgt
atctcagatgacagtagaactgcaagccagttagatgaatttcaagaatgcttgtccaaa
tttactcgatataactctgtaagaccgttggccacattgtcttatgctagtgatctgtat
aatggttccagcatagtttctagtattgaatttgaccgggattgtgactactttgcaatt
gctggagttacaaagaagattaaagtctatgaatatggcacagtcatccaggatgcagtg
gatattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttgg
agtagttaccataagaacctgctagccagcagtgattatgaaggcaccgttatactatgg
gatggattcacaggacagaggtcaaaggtctatcaggagcatgaaaagaggtgttggagt
gtcgactttaatttgatggatcccaaacttctggcttcaggttctgatgatgcaaaagtg
aagctttggtccaccaatttagacaattctgtggcaagcatcgaggcaaaagctaatgtg
tgttgtgtgaagttcagcccctcctccaggtaccatctggcttttggctgtgcagatcac
tgtgtccactactacgatcttcgtaacactaaacagccaataatggtgttcaaggggcac
cgaaaagcagtgtcttatgccaagtttgtgagtggtgaagaaattgtctctgcctcaaca
gacagccaactaaaactgtggaatgtggggaaaccatactgtctacgttccttcaagggt
catattaatgaaaaaaactttgtaggccttgcttccaatggagattatatagcttgtgga
agtgagaacaactccctctacctgtactataaaggactttctaagactttgctaactttt
aagtttgatacagttaagagtgtattagataaagaccggaaagaagatgacaccaatgaa
tttgtcagtgctgtgtgttggcgggcactatcagatggggagtccaatgtgctgattgct
gctaacagccagggtacaattaaggtgctagaattggtataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (36)   

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