KEGG   Rattus norvegicus (rat): 360893
Entry
360893            CDS       T01003                                 
Symbol
Taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
  KO
K15212  TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    360893 (Taf1a)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     360893 (Taf1a)
SSDB
Motif
Pfam: TAF1_subA COG4_N
Other DBs
NCBI-GeneID: 360893
NCBI-ProteinID: NP_001032281
RGD: 1305698
Ensembl: ENSRNOG00000061139
UniProt: Q3B7U2
Position
13:97543772..97579742
AA seq 453 aa
MMSDFSEELTKLAGAEDNPETSEFSKTRMHFPWLQKHIEAVVTGGKKRKDFAQTTSACLS
FLQEALLKHQWCRAAEYMHSYLQTLEDSDTYRKQAAPEIIWKLGSEILFYHPKSNVETFS
SFADRMKNIGVLNYLKISLQHALYLLHHGMLEDANRNLSEAETWRYGEKSASQEVLIKLV
QAYKGLLQHYSWSKKKMELSELDEDDYAYTAKSRNMLSQSSKTSTNICTLIKTPGVWDPF
VKSYVEMLEFYGDQDGARELLTNYAYDEKFPSNPNAHVYLYEFLKREKAPRAKLISVLKI
LHEIVPSHSLMLEFHTLLRKSETEEHRKLGLAVLFEVLDFSGCTKNITAWKYLAKYLKQT
LMESHREWVEEEWKSRRNWWPAFHFSFFWAKSDWKADAELACEKAFVAGILLGKGCRYFR
YILKQDHETLKKKIKRMKKSVKKYTIVNPGVHT
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgatgagtgacttcagtgaagaactgacaaagcttgctggggctgaggataacccagaa
acgtcagagttctctaagacaagaatgcatttcccatggcttcagaagcatatagaagca
gtggtgactggagggaagaagaggaaggattttgctcagacgacaagtgcttgtctaagc
ttcctccaagaagccctgctgaagcaccagtggtgtcgagctgcggagtacatgcacagt
tacctgcagaccctggaagactcagacacctacaggaaacaggctgcccctgagatcatt
tggaagcttggaagtgaaattctattttaccaccccaaaagcaacgtggagacttttagt
agcttcgctgaccggatgaaaaatattggtgtcttgaattatttaaagatctccttacaa
catgcgttgtatcttttacatcatgggatgcttgaagatgcaaacaggaatctaagtgag
gcagagacgtggagatacggtgaaaagtcggcttctcaggaagtgttaattaagcttgtt
caggcctacaaaggcctcttacagcactactcttggtccaagaagaagatggagttgtca
gagctcgatgaggatgattatgcttacactgcaaaatcccggaacatgctcagccagagc
agcaagacgtctacaaacatctgtacgctgattaaaacccctggggtttgggatcctttt
gtgaagagctatgtggagatgctggagttctatggtgaccaagatggagcccgagagctg
ctcaccaattatgcatatgatgagaagttcccgtcaaaccccaatgcccacgtctactta
tacgagtttctcaagagagagaaggcgccaagggcgaagctcataagtgttcttaagatt
ttacatgagattgtgccatcccattcactaatgttagaattccatacgctgcttagaaag
tcagagacagaagaacaccggaaactgggcttggccgtgttatttgaagtcctagacttc
tctggatgcactaagaacataacggcttggaaatacttggcaaagtatctgaagcagacg
ttaatggaaagccatcgtgagtgggttgaagaagagtggaagtccaggagaaactggtgg
ccagcctttcacttcagcttcttttgggcaaagagtgactggaaggcagacgctgagctg
gcttgtgaaaaggcttttgtagctggaatccttttagggaaaggttgtagatactttcgg
tatattttaaaacaagatcatgaaaccttgaaaaagaaaatcaagcggatgaagaagtct
gtgaaaaaatatactattgtaaatccaggcgttcacacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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