KEGG   Rattus norvegicus (rat): 360917
Entry
360917            CDS       T01003                                 
Symbol
Cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform 1
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    360917 (Cnot6l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    360917 (Cnot6l)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     360917 (Cnot6l)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     360917 (Cnot6l)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     360917 (Cnot6l)
SSDB
Motif
Pfam: Exo_endo_phos LRR_8 LRR_4 LRR_1
Other DBs
NCBI-GeneID: 360917
NCBI-ProteinID: NP_001101825
RGD: 1309128
Ensembl: ENSRNOG00000002075
UniProt: A6K672 F1M642
Position
14:13714475..13806481
AA seq 550 aa
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNDNYLRVLPYELGRLF
QLQTLGLTGNPLSQDIMSLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQ
YFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAHMHWDP
EYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSN
GGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNYTFDFK
GVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPL
VNGVHLPNRR
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgccaaaggaaaaatatgaccctccagaccctcgcagaatttacaccatcatgtcagca
gaggaggtagccaatgggaaaaaatctcactgggcagaattagaaatctcgggtagagtg
cggagcttaagtacatcactctggtcattgacacacttgacagcactgcacctaaatgac
aataaccttgctcgcattccacctgacattgccaagcttcataatctggtttacctggat
ctgtcgtccaataaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaatgacaattatttacgggttttgccttatgaacttggccggctcttc
cagctacaaactctaggtttaacaggcaatcctttatcacaggatattatgagcttatac
caggacccagatggaacccgaaagctactgaacttcatgcttgacaatcttgcagttcat
ccagagcagcttcctccgaggccatggattacattaaaagaacgagaccaaattctgcca
tcagcatcgttcacggtcatgtgttacaatgtgttatgtgataaatatgctacccggcag
ctctatggctattgtccgtcctgggcattaaactgggagtacaggaagaagggaattatg
gaagagattgttaactgggacgcagatatcattagtcttcaggaagtggaaacagagcaa
tactttactctctttctgccagcattgaaggatcgtggatatgatggatttttttctcca
aagtcacgtgccaaaatcatgtctgagcaggaaagaaagcatgtggatggttgtgcaata
ttcttcaaaacagaaaaatttacattggtgcagaagcatacagtggaattcaaccaggta
gcaatggcaaattcagatggatccgaagcaatgctaaacagagtaatgacaaaagataac
attggtgttgctgtggtgttagaggtccacaaagaactctttggaacaggtatgaagcct
attcatgctgcagacaaacagctgcttatagtggcaaatgcccacatgcattgggaccca
gagtattctgatgtgaagcttattcagaccatgatgtttgtctcagaggttaaaaacatt
ctggagaaagcctcaagtaggcctggcagcccaactgcagatcccaattccatcccgctg
gtgctatgtgcagatcttaactcattgccagattcaggtgttgtggaatatttaagcaac
ggaggagtagcagacaaccacaaagacttcaaggaactaaggtacaatgagtgtcttatg
aacttcagctgtagtggaaagaacggaagctcagaagggagaatcacacatggcttccaa
cttaagagcgcctatgaaaataacttgatgccttataccaattacacctttgatttcaaa
ggcgtgattgactacattttctattccaagactcacatgaacgtgcttggtgtcctgggg
cctttagatcctcaatggctggttgagaacaacatcactgggtgtccacaccctcacatc
ccttcagaccacttctcactgttaacacaacttgaactccaccctccactcctgcctcta
gtcaacggtgttcacttgcctaatcggaggtag

DBGET integrated database retrieval system