KEGG   Rattus norvegicus (rat): 360926
Entry
360926            CDS       T01003                                 
Symbol
Lnx1
Name
(RefSeq) E3 ubiquitin-protein ligase LNX
  KO
K10692  ligand of Numb protein X 1/2 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    360926 (Lnx1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     360926 (Lnx1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Ligand of Numb proteins
    360926 (Lnx1)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-RING_5 DUF6288 TRAF3_RING zf-rbx1
Other DBs
NCBI-GeneID: 360926
NCBI-ProteinID: NP_001101828
RGD: 1308159
Ensembl: ENSRNOG00000002272
UniProt: F7EWI3 B6RHI6
Position
14:33868517..33971217
AA seq 728 aa
MNQPDLADDPDPSPEPLCVVCGQNHSPEENHFYTYTEDVDDDLVCHICLQALLDPLDTPC
GHTYCTLCLTNFLVEKDFCPVDRKPVVLQHCKKSNILVNKLLNKLLVNCPFTEHCSEVLQ
RCNLQYHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATTLSPEVSAAATISLMTDE
PGLDNPAYTSSVEDGEPVTNPSDTGRSNRTRARPFERSTMRSRSFKKINRALSALRRTKS
GSAVANHADQGRDNSENDTVPEVFPRLFHLIPDGEITSIKINRVDPNESLSIRLVGGSET
PLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCQVLRLTVL
REQKFRSRSNAPAPDSYGPRDDSFHVILNKSSPEEQLGIKLVRRVDEPGVFIFNVLNGGV
ADRHGQLEENDRVLAINGHDLRFGSPESAAHLIQASERRVHLVVSRQVRQPSPDIFQEAG
CISNGQQSPVSGERSTSSKPAATCHEKVVSVQKDPNESLGMTVGGGASHREWDLPIYVIS
VEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEAVAILKSTPSSVVLKALEVKEQETQE
DCSPAALDSNHNVTPPGDWSPSWVMWLELPQYLYNCKDVILRRNTAGSLGFCIVGGYEEY
SGNQPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMMHACLARMLKELKGKITLTI
ASWPGTFL
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgaaccaaccagaccttgctgacgacccagatcccagccccgagcccctgtgcgtagtg
tgtggccaaaaccactccccagaggaaaaccacttctacacatacacagaagatgtagac
gacgacctcgtatgccacatctgcctacaagcattgctagaccctctggacactccgtgt
ggacacacctactgtaccctgtgtctcaccaacttcctggtggagaaggacttctgccct
gtggatcgaaagcctgtggttctgcagcactgcaagaaatccaacatcttggtcaacaag
cttctcaacaagctgttggtcaactgcccattcacagagcactgctccgaggtgctccag
cgctgcaatctccagtatcatttccagaccagctgcaaaggggcctcccactatggcctg
accaaagacaggaaaagacgctcacaagatggctgccctgatggttgcgccagcctcacg
gcaacgacgctctccccagaggtttctgctgctgccaccatctctttaatgacagacgag
cctggcctagacaatcctgcctacacgtcctcagtggaggatggtgaaccggtaaccaac
ccctcagacactggccggagcaaccgaaccagggcacggccctttgagcgctccactatg
agaagccgctctttcaaaaagatcaaccgagccctgagtgctctccgaaggacgaagagt
ggaagtgctgttgccaaccacgctgaccagggcagggacaactctgagaacgacactgtc
cccgaagtcttcccaaggttgtttcacctgattccagatggtgaaattacaagcatcaag
atcaatagagtggatcccaatgaaagcctctccataaggcttgtgggaggcagcgagacc
ccgctggtccacatcatcatccagcatatttatcgtgatggagtgattgccagagatgga
cgactgctgccaggagacatcattctcaaggtcaatggcatggacatcagcaatgtccct
cataactatgccgtgcggctcctgcggcagccctgccaggtgctacggctaacggtgctg
cgggaacagaagttccgtagcagaagcaatgctcctgcgccggactcctacggacctcgg
gatgacagcttccatgtaatcctcaacaaaagcagccctgaggagcagcttggcataaag
ctggtgcgcagggtggatgagcccggggtgttcatcttcaacgtgctgaatggcggtgtt
gccgaccgacacggccagctggaggagaatgatcgtgtgttggccatcaacggacatgac
cttcgatttggcagtccagagagcgcagctcatctgattcaggccagtgaaagacgtgtt
cacctcgtcgtgtcccgccaggttcgacagcccagcccagacatctttcaagaagctggc
tgcatcagcaacggccagcagtctcctgtctcaggggagaggagcacatcttctaagcct
gcagccacttgtcatgagaaggttgtaagtgtccaaaaagaccccaacgaatctctcggc
atgaccgttggagggggagcatcacacagagaatgggacttgcccatctatgtcatcagt
gttgagcccggaggagtcataagcagagacggaagaataaaaacaggtgacattttattg
aatgtgaatgggattgagctcacagaggtcagccggacagaggccgttgccatactgaag
agcacaccctcctcagtggtactcaaagccttggaagtcaaggaacaggagacccaggaa
gactgcagcccagcagccctggactccaaccacaacgtgaccccgcctggtgactggtcc
ccatcctgggtcatgtggctggaattaccacagtacttatataactgtaaggatgtgata
ctacgaaggaacacagcgggaagcctgggcttctgcattgtgggaggttatgaagaatac
agtggtaaccaacctttttttatcaaatccatcgtcgagggaacacccgcgtataatgat
ggaagaattagatgtggtgacattcttcttgctgtcaacggcagaagcacgtcggggatg
atgcacgcctgcttagcgaggatgctcaaagaactcaaagggaaaattactctcaccatt
gcttcctggcctggtacttttttataa

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