KEGG   Rattus norvegicus (rat): 360937
Entry
360937            CDS       T01003                                 
Symbol
Tbc1d1
Name
(RefSeq) TBC1 domain family member 1
  KO
K18341  TBC1 domain family member 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04152  AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    360937 (Tbc1d1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    360937 (Tbc1d1)
Membrane trafficking [BR:rno04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    360937 (Tbc1d1)
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    360937 (Tbc1d1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab associated proteins
    360937 (Tbc1d1)
SSDB
Motif
Pfam: RabGAP-TBC DUF3350 PID ER
Other DBs
NCBI-GeneID: 360937
NCBI-ProteinID: NP_001414246
RGD: 1304562
Ensembl: ENSRNOG00000002180
Position
14:complement(44289241..44489246)
AA seq 1257 aa
MEAITFTARKHPFPNEVSVDFGLQLVGSLPVHSLTTMPMLPWVVAEVRRLSGQCSKKEPG
MKQVRLWVSPSGLRCEPDLRKSQPWDPLICSSIFECKPQRVHKLIHNSQDPSYFACLIKE
DAAHQQSLCYVFKADDQTKVPEIISSIRQAGKIARQEELRCPSEFDDTFAKKFEVLFCGR
VTVAHKKAPPALIDECIEKFNHVSCGRRIDWDAPTGQPSAPGARPMRKSFSQPGLRSLAF
RKEFQDASLRSSTFSSFDNDIENHLIGGHNVVQPTDMEENRTMLFTIGQSEVYLISPDTK
KIALEKNFKEISFCSQGIRHVDHFGFICRECSGGGGAGFHFVCYVFQCTNEALVDEIMMT
LKQAFTVAAVQQTAKAPAQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLTNQEQ
AMIFEEVQKLRPRNEQRENELIISFLRCLYEEKQKEHSHTGEPKQTLQVAAENIGSELPP
SASRFRLDSLKNRAKRSLTESLESILSRGNKARGLQDHSASVDLDSSTSSTLSNTSKELS
MGDKEALPISESSFKLLGSSDDLSSDSESHIAEESALLSPQQAFRRRANTLSHFPVECPA
PPEPAQTSPGVSQRKLMRYHSVSTETPHERNVDHLPGGESRCCPGQPSDPPPLPPRLNPS
ASSPNFFKYLKHNSSGEQSGNAVPKSVSYRNALRKKLHSSSSVPNFLKFLAPVDENNTCD
FKNTNRDFESKANHLGDTDGTPVKARRHSWRQQIFLRVATPQKACDSPSRYEDYSELGEL
PPRSPLEPVCEDGPFGPVQEEKKKTSRELRELWKKAILQQILLLRMEKENQKLQASENDL
LNKRLKLDYEEITPCLKEVTTVWEKMLSTPGRSKIKFDMEKVHSAVGQGVPRHHRGEIWK
FLAEQFHLKHPFPSKQQPKDVPYKELLKKLTSQQHAILIDLGRTFPTHPYFSAQLGAGQL
SLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMI
ILQIQMYQLSRLLHDYHRDLYNHLEEYEIGPSLYAAPWFLTVFASQFPLGFVARVFDMIF
LQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKNTLPNLGLVQMEKTISQVFEMDIA
KQLQAYEVEYHVLQEELIDSSPLSDNQRMDKLEKTNSSLRKQNLDLLEQLQVANARIQSL
EVTVEKLLTSESKLKQAVLTLEMERSALLQMVEELRRQMAQPSTAEPDCTRLEPTGD
NT seq 3774 nt   +upstreamnt  +downstreamnt
atggaggcaatcacattcacagcgaggaagcatccgttccctaacgaggtttcggtggac
ttcggcttgcagctagtgggctccttacccgtgcattctctcactacaatgcccatgctg
ccgtgggtggtagccgaggtacgaagactcagtggccagtgctccaaaaaggagcctggg
atgaagcaagtccgcctttgggtttcgccctccggactacggtgcgaacctgacctgagg
aaaagtcaaccgtgggaccccctgatctgttccagcatctttgagtgcaagcctcagcgt
gttcacaaactgattcacaacagtcaggacccgagctacttcgcttgtctcattaaggag
gacgctgcccaccagcagagcctctgctatgtatttaaagcagatgatcaaacaaaagtg
cctgagatcattagctccatccggcaggcagggaagattgcccgccaggaagagctgcgc
tgcccctcggagttcgatgacaccttcgccaaaaagtttgaggtgctcttctgtggccgg
gtcactgtggcccacaagaaggcaccacctgcactgatcgacgagtgtatcgagaagttc
aaccatgtgagctgtggccgcagaatagactgggatgcgcccacggggcaaccatcagcg
cctggggcccggcccatgcgcaaatccttctcacagcctggactgcgctcgctggccttc
aggaaggagttccaggatgctagcctccgcagtagcacctttagctccttcgataacgac
atcgaaaatcacctaatcggcgggcacaatgtagttcagcccacagacatggaggagaac
cgaactatgctcttcacgattggccaatctgaagtttacctcatcagtcctgacaccaaa
aagattgcattggagaaaaattttaaggagatatccttttgctctcagggcatcaggcac
gtggaccactttggatttatctgccgagagtgctcaggtggcggtggcgccggctttcat
tttgtctgttacgtgttccagtgcacaaatgaagctctggttgacgagatcatgatgact
ctgaagcaggctttcacggtagctgcagtgcagcagactgctaaggcaccagcccagctg
tgtgagggctgccccttgcagggcctacacaagctctgcgagaggatagagggaatgaat
tcatctaaaaccaaattagaactccagaagcacctgaccacactgaccaatcaggagcag
gcaatgatatttgaggaagttcagaaattgagaccaagaaacgagcagcgagagaatgaa
ttaattatttcttttctgaggtgtttatacgaagagaaacaaaaggaacacagccatact
ggggagccaaagcagacactgcaggtggcagcagagaatattgggagtgaactaccaccc
agtgctagccggttcaggttagattcactgaagaacagagcaaagaggtccttaacagag
tccttagagagcattctgtcccggggcaataaagccaggggccttcaggaccattccgcc
agtgtggatctggacagctccacttctagtactctaagtaacaccagcaaagagctgtcc
atgggtgacaaggaggccttgcccatctctgaaagctccttcaaactccttggctcctca
gatgacctatccagtgactcagagagccacattgcagaagagtctgctctgttgtcaccc
cagcaggcattcagaaggagagccaacaccctgagtcatttcccagttgagtgccctgca
cctccagaacctgcccagacctctccaggggtgtctcaaagaaaactcatgcggtatcac
tccgtgagcacagagacgcctcatgaacgcaatgtggaccatcttcctgggggtgagtct
cggtgctgcccagggcagccttcagatccgcctcctcttccccctcgtcttaacccttcc
gcctcctcaccaaacttttttaagtacctaaaacacaattccagtggagaacagagtgga
aatgctgtgccaaaaagtgtctcctaccgtaatgccctgcggaaaaaactccattcttcc
tcttctgtgccaaattttctaaaatttctggctcctgtagatgaaaataacacctgtgac
tttaagaacacaaacagggactttgaatccaaagcaaaccacctgggtgacacagatggg
accccagtgaaggcccggcggcattcatggagacagcagatattcctccgagtggccact
ccacagaaggcttgtgattctccaagcagatatgaagattattcagagctgggagagctc
cctccacgttcccctttagaaccagtgtgtgaagatggaccatttggtccagtacaagag
gagaagaagaaaacgtctcgtgagcttagagagctgtggaaaaaggccatcttgcagcag
atcctgctgctgaggatggagaaggagaaccagaagctacaagcctctgagaatgatttg
ctgaacaaacgcctgaagcttgattatgaggaaatcactccttgtcttaaagaagtaact
acagtgtgggaaaagatgcttagcactccaggaagatccaaaattaagtttgatatggaa
aaagtgcactcagctgttgggcaaggtgtgccacgtcatcaccggggtgagatctggaag
tttctagctgagcagttccaccttaaacatccatttcccagtaaacagcagccaaaggat
gtgccctacaaagagctcttgaagaagctgacctcccagcagcacgccatcctcattgac
ctcgggcgaacctttccaacacatccatacttctctgcccagcttggagcaggtcagctg
tcactttacaacattctgaaggcctactcacttctggaccaggaagttggatactgtcaa
ggtctcagcttcgtggcaggcattttgctccttcatatgagtgaggaagaagcattcaag
atgctcaagttcctgatgtttgacatggggctgcggaaacagtatcggccagacatgatt
attttacagatccagatgtaccagctgtcacggctcctccatgattaccacagagacctc
tacaaccacctggaagagtatgagatcggccccagcctctacgcagctccctggtttctc
accgtgttcgcctcacagttcccacttggctttgtagccagagtctttgatatgatcttc
cttcagggatcagaggtcatatttaaagtagctttaagtcttttggggagccataaaccc
ttgattctgcagcatgagaacctggaaaccatagtggacttcataaagaacacactcccc
aacctaggcttggtgcagatggagaagaccatcagtcaggtgtttgagatggacatcgcc
aaacagctacaagcctatgaggttgagtaccatgtgctccaagaagaacttattgattcc
tctcctctcagtgacaaccaaagaatggataaattggagaaaaccaatagcagcttgcgc
aaacagaaccttgacctcctggaacaattgcaggtggcaaatgctaggatccaaagcctc
gaagtcacggtggagaagcttcttaccagcgagagtaagctgaaacaggctgtgctgacc
ctggagatggagcgctccgccctgctgcagatggtggaggagctacggaggcaaatggcc
cagcccagcactgcagagccggactgcacccggctggaacctacaggtgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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