KEGG   Rattus norvegicus (rat): 360942
Entry
360942            CDS       T01003                                 
Symbol
Pcdh7
Name
(RefSeq) protocadherin-7 isoform 1 precursor
  KO
K16498  protocadherin delta 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    360942 (Pcdh7)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    360942 (Pcdh7)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     360942 (Pcdh7)
Cell adhesion molecules [BR:rno04515]
 Cadherins
  Protocadherins
   360942 (Pcdh7)
SSDB
Motif
Pfam: Cadherin Protocadherin Cadherin_2 Mid2 KIAA1549 Cadherin_pro TMEM154 LYRIC MLANA EphA2_TM Adeno_E3_CR2 Pox_A14
Other DBs
NCBI-GeneID: 360942
NCBI-ProteinID: NP_001004087
RGD: 1303209
Ensembl: ENSRNOG00000063828
UniProt: Q68HB5
Position
14:complement(56684817..57114976)
AA seq 1247 aa
MLRMRTTGWARGWCLGCCLLLPLCFSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGEGRRLGPADSAPYPGGGGNSGSGGGSGGSKRRLDAPEGGGGTGPSGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRATDLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIVRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMM
ARYCRSKSKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTSNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVDSRPLPDVALTGKCTREC
DEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDRNRNLLNKK
LTSSYETFSAASFSKNEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq 3744 nt   +upstreamnt  +downstreamnt
atgctgaggatgcggaccacgggatgggcgcgcggctggtgcttgggctgttgtctcctt
ctgccgctctgcttcagcctggctgccgccaagcagctgctccggtaccggctggctgag
gagggccccgccgacgtgcggatcggcaatgtggcctcggacctgggcatcgtgaccggt
tctggtgaggtgactttcagccttgagtctggctctgagtatctgaagattgacaacctc
accggcgagctgagcaccagcgagcggcgcatcgaccgagagaagctgccccaatgtcag
atgatcttcgacgagaacgaatgtttcctggacttcgaggtgtcggtgatagggccctcg
cagagctgggtggacctgtttgagggtcgggtcatcgtgctggacatcaacgataacacg
cccaccttcccgtcgccggtgctcacgctcacggtggaggagaaccgacctgtaggcacg
ctctacctgctgcccacggccaccgatcgtgactttggtcgcaacggcatcgagcgctac
gagctgctccaggagcccgggggtggtggcggcggcggcgagggaaggcgcttggggccg
gcggacagcgccccctacccagggggcggcgggaacagcgggagcggcggcggctctggg
ggatccaagcggcggctggacgcgcctgagggtggcggtgggactggtccaagtggtcga
agcagtgtgttcgagctgcaggtggcggacactccagacggcgagaaacaaccgcagctg
atagtgaagggggcgctggaccgggagcagagagattcctatgaactgaccctccgagtg
cgcgatgggggcgacccacctcggtcctctcaggccatcttgcgggtgctcatcaccgac
gtgaatgacaacagccctcgcttcgagaagagcgtgtatgaggctgatctggctgagaac
agcgctcccggcacccccatcctacagttgcgcgccaccgatttggacgtaggggtcaat
ggacagatcgagtatgtatttggggcggccaccgagtcggtgagacggctactgcgtctg
gatgaaacatcgggctggctcagtgtcttacaccgtatcgaccgcgaggaagtgaatcag
ttgagattcacagtaatggcccgtgaccgcgggcagccccccaagaccgataaggccacc
gtggtcctcaatatcaaagatgagaacgacaacgttccctccatcgaaatccgcaagata
gggcgcattccgcttaaggacggggtggccaacgtggccgaagacgtcctggtggacacc
cccatcgccctggtacaagtgtccgacagagaccaaggcgagaacggggtagtcacctgt
actgtggtgggagatgtgccttttcagcttaagccagccagcgacaccgagggagatcag
aacaagaaaaagtacttcctgcacacatcagccccactggactatgagaccacccgggag
tttaacgtggtcatagtagctgtggactccggcagtcccagcctctccagcaacaattcc
ttggtggtcaaggtgggagacaccaacgacaaccctcctgtctttggccagtcggtggtc
gaggtttactttccagaaaacaacattcccggggagagggtagccacggtgctggcgaca
gacgctgacagcgggaagaatgcagagatagcctactcgctggactcttcagtgatgggg
acctttgccatcgatcccgattctggggacatcctggtcaatacagtattggaccgggag
cagactgacaggtatgagtttaaagttaatgccaaagacaaaggcattcctgtgctgcaa
ggcagcaccacggtgattgtacaggtggctgataaaaatgacaacgaccctaagtttatg
caggatgtctttaccttttatgtgaaggaaaacttgcagcccaacagccctgtgggtatg
gtcaccgtgatggatgctgacaagggacggaatgcagagatgagtctgtacatagaggag
aacagtaacattttttctattgagaatgacacagggaccatttactccacgatgtctttt
gacagggaacatcagacaacatacactttcagagtgaaggcagtggatggaggagatcct
cccaggtcggccacagccacagtctctctctttgtgatggatgaaaatgacaatgctccc
acagttacccttcccagaaatatttcctacacgttgctgccaccttcaagtaatgtcagg
acagtagtagcgacagtgttggcaacagacagcgacgatggcatcaatgcagacttgaac
tatagcattgtgggagggaatcctttcaagctgtttgagattgattccaccagtggtgtg
gtttccttagtggggaaactcacccaaaagcattatggcttgcacaggctggttgtgcaa
gtgaatgacagcggccagccttcccagtccactacgactttggtgcatgtgtttgtcaat
gaaagtgtttccaatgcaactgtgattgactctcagatagtccgaagtctgcacacccca
ctcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactcagtatt
gtcattggggtggtggctggcattatgactgtgattctaatcattttaattgtcatgatg
gcaagatactgcaggtccaaaagtaaaaatggctatgaagctggcaaaaaagaccatgag
gacttttttacaccccagcagcatgacaaatctaagaagcctaaaaaggacaagaaaaac
aaaaaatctaaacagccactctacagcagcatcgtcactgttgaagcttctaaaccgaat
ggacagaggtatgacagtgtcaatgagaagctgtcagacagccccagcatgggccgatac
cgatctgttaacggtgggcctggcagtccagacctggcaaggcattacaaatccagttcc
ccgctgcctactgtccagcttcacccccagtcaccaactgcagggaaaaaacatcaagct
gtacaagatctaccaccagccaacacatttgtgggagcaggagacaacatttcaattgga
tcagatcactgctctgagtacagctgtcaaaccagtaacaagtacagcaaacagccgttt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgagaggaccacgccggatggc
agtgttgattcaaggcctcttccggatgtagcgctgactggcaagtgcacccgtgaatgt
gacgagtatggccattcagactcctgctggatgccagtgcgcacttccccagagaggaag
aagagccagcccaaactctccactttcatgcctgttgatgaacgaggaagccaggaaaag
ctggccaatggcgaggctgccatcatgggtgaccgcaacagaaacctcctgaacaaaaag
ttgacctcatcctatgagaccttcagtgcagctagtttcagcaaaaatgaggaagccaac
cctgaggatattcctttaacaaaaacaggggaatataagccatctcctgtcaacactctc
actagaagagaagtttatctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (16)   
   UniProt (1)   
   RefSeq(pep) (15)   
DNA sequence (25)   
   RefSeq(nuc) (15)   
   GenBank (5)   
   EMBL (5)   
Protein domain (12)   
   Pfam (12)   
All databases (63)   

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