KEGG   Rattus norvegicus (rat): 360992
Entry
360992            CDS       T01003                                 
Symbol
Pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    360992 (Pnpt1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    360992 (Pnpt1)
   03016 Transfer RNA biogenesis [BR:rno03016]
    360992 (Pnpt1)
Enzymes [BR:rno01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     360992 (Pnpt1)
Messenger RNA biogenesis [BR:rno03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     360992 (Pnpt1)
Transfer RNA biogenesis [BR:rno03016]
 Prokaryotic type
  tRNA degradation factors
   360992 (Pnpt1)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C KH_1 PNPase S1 S1_2
Other DBs
NCBI-GeneID: 360992
NCBI-ProteinID: NP_001135843
RGD: 1307987
Ensembl: ENSRNOG00000003600
UniProt: G3V6G7 A6JQA4
Position
14:107078486..107109628
AA seq 784 aa
MAACRPCCLCLCLRPLSCGPLGRPRRHRALSYLQVRALWSGTRSRAVTVDLGHRKLEISS
GKLARFADGCAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDILAINGASAALSLS
DIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGVKYTQQIIQSIQQLVKEIGVAKRTPQKIFTPSAEIVKYTHTIAMEKLYAVFT
DYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQLEIIESFNVVAKEVFRSIILNEYKRCD
GRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAINGVKD
KNFMLHYEFPPYATNETGKVTGVNRRELGHGALAEKALCPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAVGLVTKSNPEKGEIEDYRLLTDILGIEDYN
GDMDFKIAGTNKGITALQADIKLPGVPVKIIMEAIQQATVAKREILQTMSKTISKPRASR
KENGPVVETVKVPLSKRAKFIGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPTAMHEA
RDFITEICRDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNSQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVLKTLNDRSSIVMGEPISQSSS
NSSP
NT seq 2355 nt   +upstreamnt  +downstreamnt
atggcggcttgcaggccgtgctgcttgtgcctgtgtctccgaccgctgagctgcggtccc
ctcggccggccaaggcggcatcgtgcactcagctatttgcaggtgcgagcgctgtggagc
ggcacccggtccagagcagtgactgtggacttgggacacagaaaattagaaatatcctct
ggaaaactggcaagatttgctgatggctgtgctgtggtacagtcaggtgatactgcagta
atggtcacagcggtcagcaaaacaaaaccttcaccttcccaattcatgccattggtggta
gactacagacagaaggctgctgcagcaggtagaatccccacaaactaccttagaagagag
attggctcttctgacaaagagattcttacaagtcgagtaatagatcgttcaattcgacct
ctctttcctgctggctatttttatgatactcaggttctctgtaatctgctagcagtagat
ggcatcaatgaacctgatatcttagcaattaatggcgcttctgcagctctctccttatca
gatatcccttggaatggacctgttggggcagtacgaataggaatgatcgatggagaatgt
gtcgttaacccaacaaggaaagaaatgtcttctagcaccttaaatttagtagttgctgga
gcacctaaaagccaaattgttatgttggaagcctctgcagaaaacattttacagcaggac
ttttgccatgctatcaaagtcggggtgaagtatacgcagcagataattcagagcatccag
cagttggtaaaagaaatcggtgttgccaagaggacaccccagaagatatttactccttct
gcagagattgtgaaatacacgcatacaatcgccatggagaaactctatgcagtttttaca
gattatgaacatgataaagtttccagggatgaagctgttaacaagataagattagataca
gaggaacatctaaaggaaaaatttccagaggttgaccaacttgaaataatagaatccttc
aacgttgttgcaaaggaggttttcagaagtattattttgaatgaatacaaaaggtgtgat
ggacgagatctgacttcacttaggaatataagttgcgaggtagatatgtttaaaacactt
catggatcagcattatttcagagaggacaaacacaggtactctgtactgttacatttgat
tcattagaatccagtattaaatcagatcaaattataacagctataaatggggtaaaagat
aaaaatttcatgttgcactatgagtttcctccttatgcaaccaatgaaactggcaaagtt
actggtgtaaatagaagagaacttggacatggtgctcttgctgagaaagctttgtgtcct
gttattcccaaagattttccttttaccataagagttacatctgaagttctcgagtcaaac
gggtcatcttctatggcatctgcatgtggtggaagtttggcattaatggatgcaggggtc
ccaatttcatctgctgttgcaggtgtagcagtgggattggttaccaaaagcaatccagag
aaaggtgaaatagaagactatcgtttgctaacagatattctgggaattgaagattacaat
ggtgacatggatttcaaaatagctggtacaaataaaggaataactgcattacaggctgat
attaagttacctggagtaccagttaaaattataatggaagccatccaacaagcaacagtg
gcaaagagggaaatattgcagacaatgagcaaaacgatttcaaaacctcgagcatctagg
aaagaaaatggaccagttgtagaaacagtaaaggttccattatcaaaacgagcaaaattc
attgggcctggtggatatcacttaaaaaaactccaggctgagacaggtgtaacaattagt
caggttgatgaagaaacattctccatatttgcaccaacacctactgcaatgcatgaggca
agagacttcattacagaaatttgcagagatgatcaagagcaacaattggaatttggagca
gtttataccgctacaataactgaaatcagagacacaggagtaatggtaaaactgtatcca
aacatgactgcagtgctacttcataattcacaacttgaccaacgaaagattaaacatccc
actgccctgggattagaagttggccaggaaattcaggtcaaatactttggccgtgatcca
gctgatggaagaatgaggctttcccgtaaagtacttcagtctccagctacaactgttctc
aaaactctaaatgataggagcagcattgtaatgggagagcctatttcacagtcatcatct
aactcttccccttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (29)   

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