KEGG   Rattus norvegicus (rat): 361289
Entry
361289            CDS       T01003                                 
Symbol
Colec12
Name
(RefSeq) collectin-12
  KO
K10062  collectin sub-family member 12
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04145  Phagosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    361289 (Colec12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    361289 (Colec12)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rno04091]
    361289 (Colec12)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Phagocytosis
   Opsonins
    361289 (Colec12)
Lectins [BR:rno04091]
 C-Type lectins
  Group 2: Type II membrane receptors (Asialoglycprotien and DC receptors)
   Scavenger receptor with a CTLD (SRCL)
    361289 (Colec12)
SSDB
Motif
Pfam: Collagen Lectin_C Filament Alpha-2-MRAP_C SepF ATG17_like Fez1 DUF6779
Other DBs
NCBI-GeneID: 361289
NCBI-ProteinID: NP_001020892
RGD: 735039
Ensembl: ENSRNOG00000016366
UniProt: Q4V885 A6KND5
Position
18:1005787..1193455
AA seq 742 aa
MKDDFAEEEEVQSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYVLCALLTITVAILGYK
VVEKMDTVTDGMETSRQTYDNKLIAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQ
QLQEITEKTSKNKDMLEKLQANGDSLVDRQSQLKETLQNNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSQNVVIMNLNNLNLTQVQQRNLITNLQRSVDDTSLAIQQIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNNQLSSFTGQMDNI
TTISQANEQSMKDLQDLHKDTENRTAVKFSQLEERFQVFETDIVNIINNISYTAHHLRTL
TSNLNDVRTTCTDTLTRHTDDLTSLNNTLVNIRLDSISLRMQQDMMRSRLDTEVANLSVV
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGSQGPPGPTGNKGQKGEKGEPGPPGP
AGERGTIGPVGPPGERGSKGSKGSQGPKGSRGSPGKPGPQGPSGDPGPPGPPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAMEPLALQNEPTP
ASEVNGCPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINSREEQQWIKKQTMG
RESHWIGLTDSEQESEWKWLDGTPVDYKNWKAGQPDNWGSGHGPGEDCAGLIYAGQWNDF
QCDEINNFICEKEREAVPSSIL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgaaagacgactttgcagaggaagaggaggtgcagtccttcggttacaagaggtttggt
attcaggaggggacacaatgtaccaaatgtaaaaataactgggcactgaagttttcgatt
atattattatatgttttgtgtgccttactgaccatcacagtagccattttgggatataaa
gttgtagagaaaatggacactgtcacagatggcatggagacatctcgccagacttacgac
aacaagctcattgctgtggaaagtgatctgaagaaattaggggaccaaactgggaagaaa
gctctaagcaccaactctgagctttctaccttcagatcagatattctggatctccgtcag
caacttcaggagatcacagaaaaaaccagtaagaacaaagatatgctagagaagttgcaa
gcaaatggggactcattggttgatagacaaagtcaactgaaggaaactctgcagaataat
tctttcctcatcaccacagtcaacaaaactctccaggcatataatggctatgtcacgaat
ctgcaacaagatactagtgtgctccagggcaatctgcagagccagatgtattctcagaat
gtggttatcatgaacctcaacaacctgaacctgacccaggttcagcagaggaaccttatc
acaaatctgcagcgatctgtggatgacacgagcctggctatccagcaaattaagaatgac
ttccaaaatctgcaacaggttttccttcaagccaagaaggacaccgattggctaaaggag
aaagtacagagtttgcagacattggctgccaacaactctgccctggccaaagccaataat
gacaccctggaggatatgaataaccagctcagctctttcacaggtcagatggacaacatt
accactatctcacaggctaacgagcagagcatgaaagaccttcaggacttacacaaggat
acagaaaataggacagctgtcaagttcagccaacttgaggaacgcttccaggtctttgag
acagatattgtgaacatcattaacaacatcagctacacagcccatcacctgaggacgctg
accagcaatctgaatgatgttaggaccacttgcacagacaccttgaccagacacacggat
gacctgacctccttgaataacacactagtcaacatccgcttggattctatttctctcagg
atgcagcaagacatgatgaggtcaaggttagacactgaagtagccaacttatcagtggtt
atggaagagatgaagctggttgactccaagcatggtcagctcatcaagaactttaccatt
ctacagggtcctcctggccccagaggtccaaaaggtgacagaggatctcagggaccgcct
ggtccaactggcaacaagggacagaaaggagagaagggagagcctggtccacctggccct
gcgggtgagcgaggcacaattggaccagtaggccctcctggagagcgtggcagcaaagga
tccaaaggctcacagggtcccaaaggatcacgtgggtccccaggaaagcctggccctcaa
gggcctagtggagaccctggaccaccaggtccaccaggcaaggatggactccctggccct
cagggccctcctggcttccagggactacagggcactgtgggtgaacctggagtacctgga
cctcgggggctaccaggcttaccaggggtgccaggcatgcctgggcccaagggaccacct
ggccccccaggtccctcaggagcaatggagccgttggctctgcagaatgaaccaacccca
gcatcagaggtcaacggatgtccgcctcactggaagaacttcacagataaatgttactat
ttttcggtggagaaagaaatttttgaagatgctaagcttttctgtgaagacaaatcttcc
catctcgttttcataaactcaagagaggaacagcaatggataaaaaagcagaccatgggg
agagagagccactggatcggcctcacagactcagagcaagaaagcgagtggaagtggcta
gatgggacacctgttgattacaaaaactggaaagctggacaacccgacaactggggcagt
ggccatgggcctggagaagactgtgctggattgatttatgccgggcagtggaatgacttc
cagtgtgatgaaatcaataacttcatttgcgaaaaagaaagggaggcagtaccatcatcc
atattataa

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