KEGG   Rattus norvegicus (rat): 361296
Entry
361296            CDS       T01003                                 
Symbol
Rnf125
Name
(RefSeq) E3 ubiquitin-protein ligase RNF125
  KO
K12170  E3 ubiquitin-protein ligase RNF125 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    361296 (Rnf125)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    361296 (Rnf125)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     361296 (Rnf125)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    361296 (Rnf125)
SSDB
Motif
Pfam: zf_C2HC_14 zf-RING_UBOX zf-C3HC4_2 zf-Di19 zf-C3HC4_4 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_5 zf-Nse TRAF3_RING Prok-RING_4 zf-RING_10 U-box Rad50_zn_hook zf-RING_6 zf-rbx1 ADNP_N
Other DBs
NCBI-GeneID: 361296
NCBI-ProteinID: NP_001101894
RGD: 1306757
Ensembl: ENSRNOG00000057832
UniProt: A0A9K3Y7V2 B1WCA3
Position
18:12528995..12550646
AA seq 233 aa
MGSLLSSDSSKSAPTSSARRTLERSGDPELPITSFDCSVCLEVLHQPVRTRCGHVFCRSC
IATSIKNNNKWTCPYCRAYLPSEGVPATDIAKRMKSEYQNCTECGTLVCLSDMRAHIRTC
EKYIDKYGPLQELGETTARCVCPFCQRELDEDCLLDHCIIHHRSERRPVFCPLCHSQPNE
SPSTFSGSLIRHLQVSHTLFYDDFIDFDIIEEAIIRRVLDRSLLEYVNQSNTT
NT seq 702 nt   +upstreamnt  +downstreamnt
atgggctccctgctgagcagcgacagctccaagtccgctccaacctcctccgcccggcgg
actctggagcgtagcggggacccggagctgcccatcacctccttcgactgctccgtgtgc
ctggaggtgctacaccagccggtccggacccgctgtggccacgtgttctgccgctcttgc
attgcaaccagtataaagaacaataataagtggacatgcccatactgccgcgcgtacctt
ccttcagagggagtgcccgcaactgacatagccaagaggatgaagtcagaataccagaac
tgtactgagtgtggaactctggtctgcctcagtgacatgagggcgcacattaggacgtgt
gagaagtacatcgataaatatggcccactgcaagagcttggagagaccactgcaagatgc
gtgtgtccattttgtcagagagaactggatgaagactgcttgctggatcattgtattatc
caccacagatcagaaaggaggcctgtgttctgcccactttgccattcacaacccaatgaa
agcccaagtaccttcagtggcagtttaattagacatttgcaagtcagccacactttgttt
tacgacgatttcatagattttgatataattgaggaagccattattcgcagagtgttagac
cgctcgcttcttgaatatgtgaatcagtcaaacaccacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (18)   
   Pfam (18)   
All databases (38)   

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