KEGG   Rattus norvegicus (rat): 361365
Entry
361365            CDS       T01003                                 
Symbol
Polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03020  RNA polymerase
rno03420  Nucleotide excision repair
rno05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    361365 (Polr2c)
  09124 Replication and repair
   03420 Nucleotide excision repair
    361365 (Polr2c)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    361365 (Polr2c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    361365 (Polr2c)
   03400 DNA repair and recombination proteins [BR:rno03400]
    361365 (Polr2c)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     361365 (Polr2c)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      361365 (Polr2c)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 361365
NCBI-ProteinID: NP_001012491
RGD: 1306935
Ensembl: ENSRNOG00000015720
UniProt: A0A8I6G683 Q5EB90
Position
19:complement(10164148..10170930)
AA seq 275 aa
MPYANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLH
DEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDL
ISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLR
PETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN
NT seq 828 nt   +upstreamnt  +downstreamnt
atgccgtacgccaaccagccaaccgtgcggatcacggaactcactgaagagaacgtcaag
ttcattatcgagaacacggacctggcggtggccaattccattcggagggtcttcatcgca
gaggtgcccataatagccattgactgggttcagattgatgccaactcctcggtccttcat
gatgaattcatcgcgcacaggcttggtttaatccccctcactagtgatgacattgtggac
aagctgcagtactcccgggactgcacatgtgaagagttctgcccagagtgctccgtggag
ttcacgctcgacgtgaggtgcaatgaagaccagacgcgccatgttacctcccgagatctc
atctccaacagcccccgggttatcccggtgacatcccggaaccgggataatgaccccaat
gactatgtggagcaggatgacatccttattgtcaagctgaggaaaggccaggagctgaga
cttcgagcctatgccaagaagggctttggcaaggagcatgccaagtggaaccctactgcg
ggggtagcttttgaatacgatccagacaacgcacttaggcatacagtgtatcccaagcct
gaggaatggccaaagagtgagtactctgagctggatgaggatgagtcacaggctccctat
gaccccaacggcaagccagagaggttttactacaatgtggagtcatgtggctcactgcgc
cctgagaccattgtcctctcagccctgtctgggctaaagaagaagctgagtgatttacag
acccagttaagccatgagatccagagtgacgtgctcaccataaactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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