KEGG   Rattus norvegicus (rat): 361435
Entry
361435            CDS       T01003                                 
Symbol
Fanca
Name
(RefSeq) Fanconi anemia group A protein
  KO
K10888  fanconi anemia group A protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    361435 (Fanca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    361435 (Fanca)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     361435 (Fanca)
SSDB
Motif
Pfam: Fanconi_A_N Fanconi_A
Other DBs
NCBI-GeneID: 361435
NCBI-ProteinID: NP_001388181
RGD: 1311380
Ensembl: ENSRNOG00000016706
Position
19:complement(68210562..68271080)
AA seq 1451 aa
MPGSPARGAAVGGGPRVLRKTWTELLAGRVKKQKYDPEREQKLKDSALKLLRYHQNMHDL
LLEAEVPQCKKLRLSELIDCGGAEASSDPSTPFIRSAFRDQASRLGVPVGVLSARVFAHS
VQQVCVEPSHPVLLSPEQSERLSSLLVSAQRLLAHNMFSRLTFCQELWKAQNSLLLEAVW
RLHTHHVVSLQELLQSHPDTEAMTTWLFRNLRFLCELIGASCPSSDTVEAMLSGLVQLLI
SWGFQGSSDPRRLLESEKIEKMPQVAADVLQRMLAFSLDTLDADSQTTLDHQAVSGWITV
YSGRTCCGMIAADSLKSFLSHALTQILTHKPVLKVSDAIQMQKEWSFAKTPHLLIDLYCR
VFVTLGPEESIGHLQEVLELQEVNWQHVLSCVSTLVVCFSEAQQLIKDWVASLMARAFES
YHLDSMVTAFLIVRQATLEGPYVFPSYADWFKESFGSSHGYHSCSKKTLVFLFKFLSDLV
PWEAPRHMQVHIFHPPLVPSKYHSLLTDYISLAKTRLADLKVSLENVGLYEDLSSTGDIA
ERESQAVQDVKKAIMVFEQTGKIPMPVLEASIFRRPYYLSHFLPALLAPRVLPEVPDSRV
AFIETLKRADKIPPSSYSAYRQACATAGDKQPDNTTSGQRTETNCAERPLGLLTAALEEL
RALMTDPTQYSVISAQVAVVSERLNAALGHRNDDDVSLRRSKIQLSVLLPTLQSQDQGVV
DLLLTAFCQNLMAACSFVPPERQSSWAVLFVRTLCGHMLLPAVLTRLCQLLRHQGPNLSA
PHVLGLAALAVHLGECRSTLPEVDPGVLAPPSSLCVPDFLNSLLTCHTRDSLLFCMKFCT
AAISYCLCKFSAQPSASLHNCLSPGLIQKFQFIVLRLFPEARAPCSPEHTARIPWKLLYL
PSADWPRAALSLWRWSSFQELLKEEEFHLTYRDWIQLELEIQPEADALSGTERHDFHQWA
IYERYLPAPSAMGGCGGDLEAACTVLVSELMDFHQRSYNHSEDSDLVLGGRTGNEDLLSR
LQEMAMDLELDQGSAVPRGCSTPESHFLFRVFRGRLQALARPGSMATSLRRQQELLICKR
LLLRLPPSVLVGSPQAGQPVSPNCEEFFNLVTSGLRNICCHGSVLTYDLTIHFFRGLLNV
CLRSQDPALVANRTLAECQTKCPMILTSALLWWSSLEPVLCSQWKKCYQSTLPQELQRLQ
EARKFASNFASDSAAPAPSPAWISAAALYFATREAGRENVTTHLKRLDCEREELLITLLF
FSLMGLLSSYLTQRDTAEYQKAVDICAEVLACLERRKVSWLMLFQLAETDAKLGHLLLLA
PDQHTRLLPLAFYSLLSCFSDGTTVREAAFLHVAVDMYLKLVQLFVDGETRIVLPQASRS
ISELQDSPVQLITKARSFLLQLIPQCPRQCFSNMTELLAGRGDCDPEVSNALQQRQQAGP
SFDLSQEPHLF
NT seq 4356 nt   +upstreamnt  +downstreamnt
atgccgggctcgccggcaaggggtgctgctgtgggcggtgggccccgggtcctccgaaaa
acatggaccgagctgctggctggcagagtcaagaagcaaaaatatgaccctgaaagggag
cagaaattaaaggattctgctctgaaactcctgagataccaccaaaacatgcatgacctt
ttgctagaggcggaagtgccacagtgtaaaaagctgcgtctcagcgagctgattgactgc
ggcggtgctgaggcttcctccgacccgtccactcccttcatccgctctgcttttcgggat
caggcctcgaggctgggggttcctgtgggggtgctgtctgccagagtgttcgctcacagc
gtgcagcaggtctgcgtggagcccagccaccccgtgctgctcagcccggaacaaagtgag
aggctgtcttccttgctagtgagcgctcagcgcttgttggcccacaacatgttctcccga
ctcaccttctgtcaagaactatggaaagcacagaactctttgttgctggaagctgtgtgg
cgtcttcacacacaccatgtcgtgagcctacaagagttactgcaaagccatcctgacacg
gaagccatgaccacgtggctcttcaggaacctacgcttcctgtgtgagctgataggagca
tcctgcccatcctctgatactgtggaagccatgctttctggtcttgtgcaactgttaatt
tcatggggatttcagggaagctcagatccaagaagactcctagagtctgaaaaaattgaa
aagatgcctcaggtcgctgctgatgttctgcagagaatgctggctttttcactcgatacc
ctggatgctgattcgcagacgactttggatcaccaggccgtgagtggctggatcactgtg
tactctggacgtacgtgctgtggtatgatagcagctgattctctgaagagcttcctcagt
cacgcgctaactcagattctgactcacaagcccgtgctgaaagtgtctgacgccattcaa
atgcagaaagagtggagctttgcaaagacaccccatctgctcattgatctgtactgcagg
gtttttgtgacactgggtccagaggagtcaattggccatttgcaggaagttctggagctg
caggaggttaactggcaacacgtgctgtcctgtgtgtctacactggttgtctgcttttct
gaggcacagcagctgattaaagattgggtggcctctttgatggcccgggcctttgagagc
taccacctagacagcatggtcactgccttcctgattgtgcgccaggctactctggaaggc
ccctacgtattcccgtcctacgcagattggttcaaggagtcctttggaagctcacatggc
taccatagctgcagcaagaagacactggtcttcctcttcaaattcctgtctgacctcgtg
ccctgggaagcccctcggcacatgcaggtgcacattttccacccacccctggtgccaagc
aagtaccactctctgctcacagactacatctccttggccaagacaaggcttgctgacctc
aaggtttccctggagaatgtaggactctacgaggatttgtcatccaccggggacattgct
gagcgtgagagccaggcagtccaggatgttaagaaggccatcatggtgtttgaacaaaca
gggaagatccctatgcctgtcctggaggccagtatcttcaggaggccctactacctgtcg
cacttcctccctgcgctgctcgcaccgagagtgctcccggaagttcctgactctcgggtg
gccttcatagagaccctgaagagagcagataagattcccccgtcgtcatacagtgcctac
cgccaagcctgtgccactgctggggacaagcagcccgacaacaccacctcgggacaaagg
acagaaaccaactgtgctgaacggcccctgggactgctcacggcagcactggaggagctc
agagctctaatgacagaccccacccaatacagtgttatatctgctcaggtggctgtggtt
tctgaaagactaaatgctgctctgggacacaggaacgatgatgatgtcagcctccggaga
tcaaagattcagctcagtgtccttctgcccacactccagagtcaggaccagggggttgtg
gatctcctgctcacagccttctgtcagaacctaatggcagcctgtagctttgtgccccca
gagaggcagagctcctgggctgtccttttcgtgaggaccctttgtggacacatgctcctc
ccggcagtgctcactcggctgtgccagctgctccgccaccagggtccaaacttgagtgcc
cctcacgtactgggcttggctgctcttgctgtccatctgggcgagtgcaggtccacactt
ccagaggtggatccaggtgttctcgctcctcccagcagcctctgcgtccctgacttctta
aacagcctcctgacctgccacacgagggactctctgctcttctgcatgaaattctgcaca
gcagcaatttcttactgtttatgcaagttctctgctcagccctctgcttccctgcacaat
tgtttgtctccaggtctgatccaaaagtttcagttcattgtgttaagattgttcccagag
gccagagcaccttgcagtccagagcacacagctcgcattccctggaaacttctgtatctt
ccttctgcagactggccgagagctgcgctctctctgtggagatggagcagcttccaagag
ctgttaaaggaggaggaatttcatttaacttacagagattggattcagttggaactggaa
attcaacctgaagctgatgccctctcaggcacagaaagacatgacttccaccagtgggca
atctatgagcgctacctgccagcaccgtcagctatgggaggctgtggtggggacctggag
gcggcgtgcacagtccttgtcagcgagctcatggacttccaccaaaggagttacaaccac
tcagaggactctgatctggttcttggtggccgcacaggaaacgaggatcttctttctaga
ctacaggagatggctatggacctggagcttgatcaaggttctgctgtgccccgtggctgt
tctactcctgagagtcactttctctttcgggtgttcagaggacggctgcaagctttggca
aggccaggcagcatggctaccagccttaggagacagcaggaactgctcatatgcaaacgg
cttctcctccgtctgcctccctctgtccttgtgggcagcccccaggccggacaacctgtc
tccccgaactgtgaagagttctttaacctggtcacctctgggttgagaaacatctgttgc
cacggcagtgtcctgacctacgaccttaccatccacttcttcagggggctcctcaatgtg
tgtctccgaagtcaagacccggcgctggtggccaaccgcacactggcagaatgccagact
aagtgtcccatgattctgacttcagcactgctgtggtggtcaagcctggaaccggtgttg
tgtagtcagtggaagaaatgctatcagagcacactgcctcaagagctgcagaggctacag
gaagcccggaagtttgctagcaatttcgcctccgattcagcggccccagcacccagcccc
gcctggatctcagctgctgcactgtactttgcaactagagaagctgggagggaaaatgtc
acaacacatctgaagaggctagactgcgaaagagaggagctcctgatcaccctcctcttc
ttttccttgatggggctactctcgtcctacctgacccaacgggacaccgctgagtaccag
aaggctgtggacatctgtgctgaggtcctcgcctgtttggaaagacggaaggtgtcctgg
ctgatgctcttccagttggcagagacggatgccaagctagggcacctccttctcttggcc
ccagaccagcacaccaggctgctaccacttgctttctacagtctcctctcctgcttcagt
gacggtaccactgtcagggaagcagctttcctgcatgttgcggttgacatgtacctcaaa
ctggtacagctctttgtggatggggaaaccaggattgtgttacctcaggccagcagaagc
atctccgagctccaggatagccctgtacaactgataacaaaggcacgcagttttctgttg
cagctaatacctcagtgtccgagacagtgcttctccaacatgacagagctgctggctggt
cgaggagactgtgaccctgaggtgagcaacgccctccagcaaaggcagcaggctggcccc
agctttgacctctcccaggagcctcatctgttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (2)   
   RefSeq(pep) (5)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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