KEGG   Rattus norvegicus (rat): 361542
Entry
361542            CDS       T01003                                 
Symbol
U2af1l4
Name
(RefSeq) splicing factor U2AF 26 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    361542 (U2af1l4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    361542 (U2af1l4)
Spliceosome [BR:rno03041]
 Complex A
  U2 snRNP components
   U2 related factors
    361542 (U2af1l4)
 Complex B
    361542 (U2af1l4)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2 zf-CCCH_3 Nup35_RRM_2
Other DBs
NCBI-GeneID: 361542
NCBI-ProteinID: NP_001008775
RGD: 1305600
Ensembl: ENSRNOG00000024497
UniProt: Q7TP17 A6J9Z2
Position
1:94943684..94945906
AA seq 220 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQ
TADGSHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRRE
EDAERAVAELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRN
LRRQLYGRGPRHRSPPRSHTGHRPRERNRRRSPDHRHGRF
NT seq 663 nt   +upstreamnt  +downstreamnt
atggctgaatatttagcttcgatattcgggactgagaaggacaaggttaactgctctttt
tactttaagattggggcctgccggcacggggaccggtgctcccgacttcacaacaaaccg
actttcagccagaccatagtcctgctcaacttgtaccggaacccacagaacacagcccaa
actgcagatggatcacactgtcacgtgagcgatgtggaggtgcaagaacactatgataac
ttctttgaggaggtattcacagaactgcaggagaagtatggagaaattgaagagatgaat
gtgtgtgataacctcggggaccacctcgtgggcaatgtctatgttaagttccggcgggag
gaggatgcagagcgggctgtggcggaactcaataaccgctggttcaacgggcaggctgtg
catgctgagctgtctccggtcactgacttccgagagtcatgctgccgacagtatgagatg
ggggaatgtacccgaggtggcttctgcaactttatgcacctgcgacccatatccaggaac
ttgcgccggcagctctatgggcgaggacccaggcataggtcacctccaaggtcccataca
ggtcaccgaccccgagaaaggaaccgacgccgttccccagaccaccggcatggtcgcttc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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