KEGG   Rattus norvegicus (rat): 361646
Entry
361646            CDS       T01003                                 
Symbol
Katnip
Name
(RefSeq) katanin-interacting protein
  KO
K22858  protein JBTS26
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    361646 (Katnip)
Cilium and associated proteins [BR:rno03037]
 Other cilia and associated proteins
  Other cilium assembly proteins
   361646 (Katnip)
SSDB
Motif
Pfam: DUF4457
Other DBs
NCBI-GeneID: 361646
NCBI-ProteinID: NP_001382684
RGD: 1595846
Ensembl: ENSRNOG00000016635
Position
1:189700838..189867402
AA seq 1610 aa
MDGQALRKVERSRSCSQERKEGYSKDMVTDFDEKHDEYLILLQQRNRILKHLKAKDPVQL
RLEHLEQGFSVYVNGANSELKTSPRKAVHTDFSRSASQAEGSQDYGRRTLFREAEEVLRC
SSRTAPGKVQRRGWHQKSVQIRTEAGSRLHIEPPLDCSEDFESHEDVIDKHEDATGDHTQ
ELRKGLGLSTSLQTQEDGSSDEYDSIEEDVLSETETEDPVLPVYARDECPLPSHDAVLKD
VPKDQELEGRPPQTTDTLVVMEFNPASKSNKMERILSAKRKENAEVFILSKPESVLNPQP
PAVFPDQERACSRSGSRRDRPLSATRKACAAEDREEDASAVLKAIQVENAALQQVLLSQD
PELQTSPQQDAKEPPVKSRPSLLKAKEDIPEPLAVTPVTTNPELCRTAGGAKAVSQALDR
MSPLGSRQQHKLLGVLQTVESDTTHPSQVAIPTEKPGPDPEEKWKARIDEIEDAIYVTME
ILSNWGNASWVGLTEVQFFDLNNIKLYVSPHDVDIRNAVLPGELGCLVNRDLVSKKDPPV
WTCPFHPPLQLYFIIHNMQQLRDFGLATIKVRNYWTADGDLDIGAKNVKLYVNKSLLFDG
VLEKGGGEAPFDCTIPVDLQSEKNENPEKALRTDWKESKGALKMAATGKDKELGLSCLQP
AESLDMSVSSQGDFLGEKVNATYCPKKSLSKLQEDVRLLATPASMGDGPSVPSSSSPGKC
LPLEEELSFIQQLENLRSRKIPEPTGKTPHWLQPSLTGMGKKQTVRKPKPLWLSPEKDLE
QKSRLPSYDVIGDASGEVEAREKGPRREQGRSSSWNVITEERPPKASSKACGSDLDIFSQ
PPSRDRPASGRRALKKDASSSHGDDRPASKEDAQATQTLPWLQWDGEQEHALHASWDSLT
AFDRAHRGRISALEPQGDILDEFLKQQRSSRHEEYPAPGREEESEPSTETDGDSDFKIPV
LPYGQHLVIDIKSTWGDRHYVGLNGIEIFSSSGEPVQISSITADPPDINILPAYGKDPRV
VSNLIDGVNRTQDDMHVWLAPFTPGMTHTISIEFTHPCQVALIRIWNYNKSRIHSFRGVK
DITMLLDTQCIFEGEIAKASGTLMGAPEHFGDTILFTTDEDILEAIFCLDDTFDMDAESL
CGLQPEEALRRPSTADGEGQDERPFTQAGLGAQDQVPGLELQSGPPVSDVFTPEPGIFYG
LCLRLNFTASWGDLHYIGLTGLEVVGKDGEALPIQPQQLSASPRDLNDLPEYSDDSRTLD
KLIDGMNITTEDEHMWLIPFSPGLDHVVMIHFDRAQSIAGLRLWNYNKSPEDTYRGVKIA
HVSLDGLCVSPAEGFLIRKGPGNCHFDFAQEILFGDYLQTRLPPAPSRRLDAKSLERASM
DYEAPLMPCGFIFQFQLLSSWGDPYYIGLTGLELYDEHGERIPLSQNNIAAFPDSVNALE
GVCGDVRTPDKLIDQVNDTSDGRHMWLAPILPGLVNRVYVIFDLPTTVSMIKLWNYTKTP
QRGVKEFGLLVDDLLVYNGILAMVSHVVGGILPTCEPTVPHHTILFAEDTDLCHQEKHTI
ISKPEEDQDIQMMNENQVITTSRRKPATADPALRPKTCIREKESSRRWRC
NT seq 4833 nt   +upstreamnt  +downstreamnt
atggacggtcaggccctgcggaaggtggagagaagccggtcctgctctcaggagagaaag
gagggttacagtaaggacatggtgacagactttgatgagaaacatgatgagtatttaata
ttgcttcagcagagaaaccggatattaaagcatctgaaagccaaggaccccgtgcagctg
aggttggaacacttggagcaaggtttctctgtctatgtcaatggggccaattcagagctg
aagacatccccacggaaagctgtgcacacagacttctccagaagtgcctcacaggcggag
gggtcacaagattatggacgaagaaccctattccgagaagctgaagaagtcttaagatgc
agctccaggacagcaccaggaaaagtccagcgccgaggatggcaccagaaatctgtgcag
atcagaactgaagctggctctcgtctccacattgaacctcctctggactgttcagaagat
tttgaatcacatgaggatgtgattgacaagcatgaggatgccactggggaccacacacag
gagctgagaaaaggtcttggactcagcacaagcctccagactcaagaggacggctccagt
gacgagtatgactctattgaggaagacgtcctctctgagacagagaccgaggaccctgta
ttgccagtgtatgccagagatgaatgtccccttcccagccatgatgcagtgctgaaagat
gtccccaaggaccaggaactggaaggccggcctccccagaccacagacacccttgtggtg
atggagtttaacccagcttctaaaagtaataaaatggaacggattttatctgctaagcgg
aaagagaatgctgaggttttcatcctcagcaaaccagaatcagtcctgaacccacaaccc
ccggcggtgttcccagaccaggagagggcctgttccagatctggaagccggagagatagg
cccttgtcagccacccgcaaagcatgtgcagccgaggaccgagaggaggatgcctcggct
gtgctgaaagccatccaggtggagaatgcagctctgcaacaggtgctcctcagccaagat
cctgagctccaaaccagtccacagcaggatgccaaggaaccaccagtaaaatcacggccc
agtctgctgaaggccaaggaggacatccctgagccgcttgctgtcactccagtgaccact
aatcctgagctgtgcaggacagcagggggagccaaagctgtcagccaagccctggacaga
atgagccctttgggaagcagacaacagcataaacttctgggagtcttgcagactgtggaa
agtgacactacccatcccagccaggtggctataccaacagagaagccaggaccagatcca
gaggaaaagtggaaagcaagaatagatgaaattgaagatgccatctatgtgactatggaa
atcctgtctaactggggcaatgcatcatgggtgggtctcacagaagtccagttctttgac
ctgaacaacataaagctttatgtctcacctcatgatgtggacatccggaacgcagtgttg
ccaggcgagctgggctgccttgtcaacagggatttagtgagcaagaaggaccctccagtg
tggacctgccctttccaccctccacttcagctctatttcattattcacaacatgcaacag
cttcgtgacttcggtctggccacgatcaaggttcggaattattggacagcagatggggat
cttgacattggtgctaagaacgtgaaactctatgtcaacaaaagcctcctcttcgatggc
gtgctagagaaaggaggaggtgaagccccgtttgattgtaccatccctgttgatctgcag
agtgagaagaatgagaacccagagaaggccttgaggactgactggaaagaaagcaaaggc
gccctcaagatggctgccacgggtaaggataaggagcttgggctcagctgcttacagcca
gctgaatccttggatatgagtgtttcctcacaaggagatttccttggtgaaaaggtgaat
gctacatattgcccgaagaaaagtttgtccaagttacaggaagatgtaagactgttggca
acccctgcgtctatgggtgatgggcccagtgtcccttcttcctcctctcctgggaaatgt
cttcctctagaagaggagctctctttcatccaacagctggaaaacctcagaagtaggaaa
atccctgaacccactgggaaaactccccactggttacagccttctctcacaggaatgggc
aaaaaacagacagttaggaagcccaaacccctgtggctcagtcctgaaaaagatctggaa
cagaagagcaggcttccatcttatgacgttattggtgatgcttctggagaggtggaggcc
agagaaaaaggcccgaggcgtgagcaagggagaagtagcagctggaatgtcatcactgag
gagagacccccaaaggcatcctccaaagcctgtggcagtgacttagacatctttagccag
cctcctagcagggatcgccctgctagtgggaggagggccctgaagaaggacgccagcagt
agccatggtgatgaccggccagccagcaaagaagacgcccaggccacccagacactgcct
tggttgcagtgggatggtgagcaggagcatgcactgcatgcatcgtgggattccctcact
gccttcgaccgtgcccaccggggccgcatctctgccctggagccacagggggacatcctg
gatgagttcctgaagcagcagaggagcagccggcatgaggagtacccagcccctggcaga
gaggaggagtcagagccctccacagagacagatggtgacagcgattttaaaattccagtc
ctcccttatggacagcacttggtcattgacatcaagtctacatggggagatagacactat
gttggccttaatggcatagaaatattcagctcctcaggggaaccagtacagatttccagc
attacagcggaccctcctgacatcaatattttaccagcttatgggaaagacccacgtgta
gtgtctaacctcattgatggggtgaacaggacccaggatgacatgcatgtctggctggcc
cccttcacaccaggcatgacccacaccatctctattgaattcacacacccttgccaagtt
gccctgattaggatttggaattacaataagtctcgaatccactccttccgaggtgtgaaa
gacatcacaatgctgttggatactcagtgcatctttgaaggagaaattgccaaagcctca
ggaaccctgatgggagcccccgagcactttggagacactattctattcaccacggatgag
gacatcctagaggccatattctgtttggatgatacttttgacatggatgctgagagtctg
tgtggtcttcagcctgaagaggcgctaaggaggcccagcactgccgatggtgaaggtcag
gatgaaaggcccttcacacaggctggcttgggtgcccaggaccaggtaccaggactagag
ctacaatccggcccccctgtctctgatgtcttcactcctgagccaggcatcttctacggg
ctatgcctccgactaaacttcacagcctcctggggggacctgcactacataggactcact
ggcctggaagtagtaggcaaggacggcgaggccctgcccatccaaccacagcagctctct
gcctctcccagggacttaaatgacctgcccgagtacagtgatgactcacggaccctggac
aagttaatcgatggcatgaacatcaccaccgaggatgagcacatgtggctgatccccttt
tcccctgggttggaccatgtggttatgatccactttgacagagcccaaagcattgctggc
ctgcgcctctggaactacaataaatctccggaggacacctaccgaggggttaaaatcgca
catgtgtccctggatggcctgtgcgtgtctcctgcagaaggctttctcatccgaaagggg
cctggtaactgccattttgattttgcacaagaaatcctctttggggactacctacagacc
cggctaccaccagcacccagcaggaggttagatgcgaagagcctggagcgagccagcatg
gactacgaggccccactcatgccctgtggcttcattttccagttccagctgctgtccagc
tggggagatccctactacattggcctcacggggctggagctgtatgatgagcatggggag
aggatcccgttgtcccagaacaatattgctgcctttccagacagtgtgaatgcactagag
ggtgtatgtggggatgtgagaacccctgacaagcttatcgaccaagtcaacgacaccagt
gatggcaggcacatgtggttggctcccatcctgcctggcttggtgaaccgagtgtatgtc
attttcgatctgcccaccactgtgtctatgatcaaactgtggaattacacgaaaacacct
cagcgaggggtgaaggagtttggcctgctggtggatgacttgctggtgtacaatggcatt
cttgccatggtgagccacgtggttgggggcatcctacccacatgtgagcctaccgtgccc
caccacaccatcctttttgccgaggacactgacctctgtcaccaggagaaacacaccatc
atcagtaagcctgaggaagaccaggacatacaaatgatgaatgaaaaccaggtcatcacc
acctctcgcaggaagccagccactgctgacccagccttacgtcccaaaacctgcatacgt
gagaaggagagctcaaggcgttggcggtgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (1)   
   Pfam (1)   
All databases (53)   

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