KEGG   Rattus norvegicus (rat): 361709
Entry
361709            CDS       T01003                                 
Symbol
Ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
  KO
K19022  AP-5 complex subunit beta-1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    361709 (Ap5b1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     361709 (Ap5b1)
SSDB
Motif
Pfam: AP5B1_middle AP5B1_C AP5B1_barrel AP5B1_N FANCI_HD2
Other DBs
NCBI-GeneID: 361709
NCBI-ProteinID: NP_001257961
RGD: 1562657
Ensembl: ENSRNOG00000026114
UniProt: D3ZVB0
Position
1:212305612..212309643
AA seq 876 aa
MGPLSREAWAQRLGSFRASPSAFLAGAEGEDLGHDLLSDLRSEKLSELIKVSLLTLSLEY
SDKLWPDALAAEAAATSLLDTLVLLPSKPSALRRLLLLAATTALVSGGALGPTSEASSRL
LPLLLGLASGQDMGRSFGTTSEQRHLQATACECLGELERCKPGLLAGALGVLRSLLGQKG
PIQPVSLLLALVLHNTLVVQSRFGAGLQGLLVAKDSSPGSCPWDWTLAEEWDDHLKPQAH
GWPTAGEEERDFPILDPNPEDTRELKAAVAQLLDTSYLLTPVAQAQLVWLLGWALQGLRG
QPPVLFKPQLVRLLGTAQLTLLHSVLSLKAAFGEALFTAQDEALLLRRLTLVAQHPALPS
PTHLFYLHCILSFPENCPLGPEGEEAAPLLLGPQLRRGLMPSLLHDPMVLLARLHLLCLL
CADDEEEEKGQLQGPQWFLQELLAGLQQRAAVDGGPRALATLCFQASYLVTSCLTRQPTV
QTSLVHGLAQLYRARPSLAPHFVDLLDEVSPELREPLRKVLLREVVARPGKNEALRWHLQ
MLAKVAEGATQSAILGFLQAAAIHCTDWGLHQALLRVCRALLRTGGGEGLADLLQELARQ
LENADGRDHARLYYVLLSHLSSSKLGMALGPSLAAPALASSLMAENQGFASALMVQETSA
PIQLSVGPQKAKGPLPVLHLQVQALDTPVYSLELRFRVEGQLYEPVEAVHIPSVRPGQPA
HPLHLPLQPRSPAPARLHVRALYTTPAGLTCHAHLPPLSVNFADLFLPFPQLPKGSELCF
FDELWNSCLPKGVESRVWCPLGPQGLEALVSQHLEPFVVVAQPPTTYLIAVRLPPHSMLL
LRLEKAQVHGVPVALRTDDWAVLPLVGDYLRGLAAH
NT seq 2631 nt   +upstreamnt  +downstreamnt
atgggtcccctgagtcgagaagcctgggcccagcgcctggggtctttccgagccagccca
tccgcctttctagcaggtgctgaaggtgaggatttgggtcacgacctgttgagtgaccta
aggagtgaaaagctaagcgagctgatcaaggtttccttactgacactgagcttggagtac
tctgacaaactttggcctgatgcccttgccgcggaggctgctgccacttccttgttggac
acgcttgtcctcttgccctcaaaaccttcagctctccggaggctcctgttgttagcagcc
actacagccctggtgtcaggtggtgctctcggacccacttcggaagcttccagccggctc
ctgcccttacttcttggcttagcttctggccaagacatgggacgaagctttggaaccacc
tcagagcagcgccatctacaggccacagcgtgtgaatgccttggagaacttgagcgctgt
aaacctgggttgctggccggcgctctgggggtgctgcggagcctcctagggcaaaagggt
cccatccagcctgtcagcctgcttctcgcccttgttctgcataacaccttggtggtacag
tccaggtttggggctggcctgcaaggcctgcttgtggctaaggactcctcccctgggagt
tgtccctgggactggacactggctgaagaatgggatgaccatcttaagccccaggcgcac
ggctggcccacagctggggaggaggaacgtgactttccaattctggatcccaaccctgag
gacactcgagagctgaaggctgcggtggcccagcttctggacacttcctatctgctcact
cccgtggctcaggcccaacttgtgtggctgttgggctgggcccttcagggtcttcgggga
cagccaccagtgcttttcaagccacagctagttcggctgctgggcacagcacagcttaca
ctgttacactcagttctatctctcaaggcagccttcggtgaggccctgttcactgctcag
gatgaagcgctcctgctccgtaggcttaccctggtggcccagcacccagccttaccctcg
cccacacacctcttttacctgcactgcatcctgagcttccctgagaattgtccattaggt
ccagaaggggaagaggctgccccactgctgttggggccccagttacgccggggcctcatg
cccagtctccttcatgacccaatggtcctcctggcccgcctgcatttgctatgcctgctt
tgtgctgatgatgaggaagaggagaaaggccagcttcagggcccacagtggttcctgcag
gagctgctggccggtcttcagcagagggcagccgtggatggcggtccccgagccttggcc
actctctgtttccaggcctcatacctcgttaccagctgcctgaccagacagcccacagtc
cagacatctctggtccatgggctggcccaactgtaccgagcccgaccttccctggctccc
cactttgtggacctcttagatgaggtaagccctgagctgagagagcccctcaggaaggtg
ctgctacgagaggtggtagccaggccaggcaagaacgaagcacttcgctggcacctgcag
atgctggcaaaggtggcagagggagccactcagagtgccatccttggctttctacaggct
gcagccatacactgcaccgactggggcctacaccaggccctactgcgggtgtgccgtgct
ctgctccggacgggtgggggagaggggctggcagacctgttgcaggaactggccagacag
ctggagaacgctgatgggcgggaccatgcccgactgtactatgtcctcttgtcccatctg
tcaagttctaagttggggatggcactgggcccctcactggctgcccctgcgctggcctcg
tcactgatggctgagaaccagggcttcgcatcagcactgatggtgcaggagacctcagct
ccaattcagttgagtgtggggcctcagaaggccaaaggcccactcccggtgctgcatctg
caggtgcaggcactggatactcctgtgtactctctggagctgcgctttcgtgtagaagga
caactgtacgagcctgtggaggctgtccacataccctctgtgcgtccaggacaacctgcc
catcctctgcacctgcctttgcagccccgtagcccagcccccgcccgcctgcatgtccgg
gccctttacaccacaccggccggcctcacgtgccatgcccacctaccacccctgtctgtg
aactttgctgacctcttcctgcctttcccccagctccccaagggctctgagttgtgtttc
tttgatgagctctggaactcctgcctgccaaagggtgtagaaagtcgtgtgtggtgtcca
cttgggccacagggcctggaggccttggtgtcccaacacctagagccctttgtcgtggtg
gcgcagccccctaccacctacctcatagctgtccgcttgcctcctcactccatgctgctg
ctgcgcctggagaaagctcaggtgcacggtgtgcctgtggccctcaggactgatgactgg
gctgtgctgcccctggtgggggactacctccgagggcttgcagcccactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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