KEGG   Rattus norvegicus (rat): 361712
Entry
361712            CDS       T01003                                 
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
  KO
K10601  E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04120  Ubiquitin mediated proteolysis
rno04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    361712 (Syvn1)
   04120 Ubiquitin mediated proteolysis
    361712 (Syvn1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    361712 (Syvn1)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     361712 (Syvn1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    361712 (Syvn1)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4 zf-rbx1 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_16 zf-RING_11 zf-RING_5 zf-RING-like zf-ANAPC11 zf-HC5HC2H zf-C3H2C3 zf-Nse Endonuclease_7 Prok-RING_4
Other DBs
NCBI-GeneID: 361712
NCBI-ProteinID: NP_001094209
RGD: 1310488
Ensembl: ENSRNOG00000020950
UniProt: F7FG68
Position
1:212766736..212775426
AA seq 608 aa
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGAPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAATSRPSGAA
TTTAAGTSTSAPASGSVPGPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEET
ASTVVSATPSTSVPSSEAPAPSLGASPPIPEAEKPPVSTAEELPEDGEPDAAELRRRRLQ
KLESPVAH
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggcagtggtggct
catgcctactacctcaaacaccagttctaccccactgtcgtgtatttgaccaaatccagc
cccagtatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaggtg
atgggcaaggtgttttttgggcagctgagggcagcagaaatggagcacctcttggaacgg
tcctggtatgctgtcactgagacttgcttggccttcaccgtttttcgggatgacttcagc
cctcgctttgtggcactctttacactccttctcttcctcaaatgtttccattggttggct
gaagaccgtgtggactttatggaacgcagccccaacatctcttggcttttccactgccgc
attgtctctcttatgttcctcctgggcatcctggacttcctctttgtcagccacgcttat
cacagcatcctgacccgaggggcgtctgtgcagctggtgtttggctttgagtatgccatt
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agtgagaatccctgggacaacaaggccgtgtacatgctctacacggagctgtttacaggc
tttatcaaggtcctgctgtacatggcctttatgaccatcatgatcaaggtgcacacattt
ccgctctttgccattaggcccatgtacctggccatgaggcagttcaagaaagctgtgaca
gatgccatcatgtctcgcagagccatccgcaacatgaacacactgtacccggatgccacc
cccgaggagctccaggcaatggataacgtctgtatcatctgcagagaagaaatggtgacc
ggtgctaagagattgccttgcaaccacatctttcatacgagctgcctgcgctcctggttc
cagagacaacagacctgcccgacatgccgtatggatgttctgcgggcatcattgccagcc
cagtcaccaccaccccctgagcctgctgaccaaggagccccccctgcccctcatccccca
ccactgctgccacagccccctaatttcccccagggcctcctgcctccttttcctccgggc
atgttcccactgtggccaccaatgggtccctttccacctgtcccacctcccccaagctca
ggagaggctgcagctcctccgtccaccagtgcagccacttctcgacccagtggagcagcc
accaccacagctgctggcacgagtacttctgccccagcatctggctctgtacctggccca
gaggctggtcctgcccctggcttccctttccctcctccttggatgggtatgcctctgcct
ccaccttttgccttccccccgatgcctgtgcctcctgcgggctttgctggcctaacccca
gaggagctgcgggcactggagggccatgagcggcagcacttggaggcccggctacagagt
ctgcgcaacatacacacactactggacgccgccatgctgcaaatcaaccagtacctcact
gtcctggcctccctgggcccccccaggccagctacttcagtgaaccccactgaagagact
gcctctacagtggtatctgctaccccttccaccagcgtccccagctctgaggctcctgcc
ccatccctgggagcctccccaccaattcctgaagctgaaaagcctcctgtgagcactgca
gaagagcttcctgaggatggagagcctgatgctgcagaactccgccggcgtcgcctgcag
aagctcgagtctcccgttgcccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (42)   

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